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The map label for this gene is 226950340

Identifier: 226950340

GI number: 226950340

Start: 3339701

End: 3339991

Strand: Reverse

Name: 226950340

Synonym: CLM_3306

Alternate gene names: NA

Gene position: 3339991-3339701 (Counterclockwise)

Preceding gene: 226950341

Following gene: 226950338

Centisome position: 80.38

GC content: 30.93

Gene sequence:

>291_bases
ATGGCAAATATAAATTTGAGTTTACAAGTGCTACCTGTAGTTAGTGAAGAAGAGATATATTCAGTAGTGGATAAAGTTAT
AGAACTTATAGAAGCTTCTGGAGTTAAATATGAAGTAGGACCTATGGAAACTACCATGGAAGGTGAAATGGATATTCTTT
TAGATATTGTTAAAAAGGCTCAGGATATATGCGTTAAGGAAGGAGCTAAGAGAGTTATTTCAGTTATAAAAATAGACTAT
AAACCAGAGGGCGTTACAATGGATGAAAAAACTTATAAATATAAAAAATAG

Upstream 100 bases:

>100_bases
GTGCGGAAAAATGTGTGCAGTAAGAAATATGAACAGAGTTACAGAAGGAAAAGACTTAAACATGTTAAGAGATGATGATT
AATGTATAGGAGTGACTATA

Downstream 100 bases:

>100_bases
ATTACAGTTATAAGAAGGAAAAATCATTATACATGGCGAACTTTATACAGGTAAGGTTGGAAGGGTAAGTTATACGTACT
AAAAAAACTTACTACTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MANINLSLQVLPVVSEEEIYSVVDKVIELIEASGVKYEVGPMETTMEGEMDILLDIVKKAQDICVKEGAKRVISVIKIDY
KPEGVTMDEKTYKYKK

Sequences:

>Translated_96_residues
MANINLSLQVLPVVSEEEIYSVVDKVIELIEASGVKYEVGPMETTMEGEMDILLDIVKKAQDICVKEGAKRVISVIKIDY
KPEGVTMDEKTYKYKK
>Mature_95_residues
ANINLSLQVLPVVSEEEIYSVVDKVIELIEASGVKYEVGPMETTMEGEMDILLDIVKKAQDICVKEGAKRVISVIKIDYK
PEGVTMDEKTYKYKK

Specific function: Unknown

COG id: COG0011

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0045 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002767
- InterPro:   IPR016198 [H]

Pfam domain/function: PF01910 DUF77 [H]

EC number: NA

Molecular weight: Translated: 10812; Mature: 10681

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANINLSLQVLPVVSEEEIYSVVDKVIELIEASGVKYEVGPMETTMEGEMDILLDIVKKA
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHH
QDICVKEGAKRVISVIKIDYKPEGVTMDEKTYKYKK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANINLSLQVLPVVSEEEIYSVVDKVIELIEASGVKYEVGPMETTMEGEMDILLDIVKKA
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHH
QDICVKEGAKRVISVIKIDYKPEGVTMDEKTYKYKK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8052128; 11792842 [H]