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The map label for this gene is yebR [H]

Identifier: 226950338

GI number: 226950338

Start: 3337192

End: 3337689

Strand: Reverse

Name: yebR [H]

Synonym: CLM_3304

Alternate gene names: 226950338

Gene position: 3337689-3337192 (Counterclockwise)

Preceding gene: 226950340

Following gene: 226950337

Centisome position: 80.32

GC content: 29.12

Gene sequence:

>498_bases
GTGTTTGCATTAGAGGATTTTAAGGGATTAACAGAAGAGCAAAAATATGAAAATATGCTTTCATTTTTGAAAGGTCAATT
ACTTGGTGAAAAAGATGTAATAGCAAATCTTAGTAATGCTTCAGCTATAATAATGGCTTTAATAGATAATTTAAATTGGG
CAGGATTTTATTTAATGAAAGATGGAGAATTAGTTTTAGGACCATTCCAAGGAATGCCAGCCTGTAATAGAATAAAAATT
GGCAAGGGAGTATGTGGAGTAGCCATATCCTCTAGACAAATTCAAAGAGTAAATGATGTACATAAATTTGAAGGACATAT
AGCTTGTGATAGTTCAACTAATTCTGAATTAGTAGTGCCTATAATTAAAGAAGATAAAGTTTTAGGAGTTTTAGATTTAG
ATAGTATAGAATTTGGAAGGTTTACAGAACTTGAAGAAAAATATTTTAAAAAATTTGTGCAAATCCTTGTAGAAAATATA
GATTGGAGTGGTAAATAA

Upstream 100 bases:

>100_bases
TTATTTCCAAAGAAATATATTTAATATTAAAAGATATCAATATTAAATTTTTTGTAATATGTAAAGCTTTAAATTATAGA
TAAAAAGGGAGGGCTTAAAA

Downstream 100 bases:

>100_bases
TGATGATGAGAGATAAAATATTCGAAACTTTAGATAGATTAGTAAAAATACCTAGTATATCAGGAACAGAAAAAGAAAAT
TTGGCAGTAGATGAAATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MFALEDFKGLTEEQKYENMLSFLKGQLLGEKDVIANLSNASAIIMALIDNLNWAGFYLMKDGELVLGPFQGMPACNRIKI
GKGVCGVAISSRQIQRVNDVHKFEGHIACDSSTNSELVVPIIKEDKVLGVLDLDSIEFGRFTELEEKYFKKFVQILVENI
DWSGK

Sequences:

>Translated_165_residues
MFALEDFKGLTEEQKYENMLSFLKGQLLGEKDVIANLSNASAIIMALIDNLNWAGFYLMKDGELVLGPFQGMPACNRIKI
GKGVCGVAISSRQIQRVNDVHKFEGHIACDSSTNSELVVPIIKEDKVLGVLDLDSIEFGRFTELEEKYFKKFVQILVENI
DWSGK
>Mature_165_residues
MFALEDFKGLTEEQKYENMLSFLKGQLLGEKDVIANLSNASAIIMALIDNLNWAGFYLMKDGELVLGPFQGMPACNRIKI
GKGVCGVAISSRQIQRVNDVHKFEGHIACDSSTNSELVVPIIKEDKVLGVLDLDSIEFGRFTELEEKYFKKFVQILVENI
DWSGK

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=147, Percent_Identity=44.8979591836735, Blast_Score=156, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6322781, Length=155, Percent_Identity=43.2258064516129, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18480; Mature: 18480

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFALEDFKGLTEEQKYENMLSFLKGQLLGEKDVIANLSNASAIIMALIDNLNWAGFYLMK
CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEE
DGELVLGPFQGMPACNRIKIGKGVCGVAISSRQIQRVNDVHKFEGHIACDSSTNSELVVP
CCCEEEECCCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHCCEEEECCCCCCEEEEE
IIKEDKVLGVLDLDSIEFGRFTELEEKYFKKFVQILVENIDWSGK
EECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFALEDFKGLTEEQKYENMLSFLKGQLLGEKDVIANLSNASAIIMALIDNLNWAGFYLMK
CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEE
DGELVLGPFQGMPACNRIKIGKGVCGVAISSRQIQRVNDVHKFEGHIACDSSTNSELVVP
CCCEEEECCCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHCCEEEECCCCCCEEEEE
IIKEDKVLGVLDLDSIEFGRFTELEEKYFKKFVQILVENIDWSGK
EECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]