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The map label for this gene is yqeB [H]

Identifier: 226950324

GI number: 226950324

Start: 3319422

End: 3320231

Strand: Direct

Name: yqeB [H]

Synonym: CLM_3289

Alternate gene names: 226950324

Gene position: 3319422-3320231 (Clockwise)

Preceding gene: 226950323

Following gene: 226950325

Centisome position: 79.88

GC content: 29.51

Gene sequence:

>810_bases
ATGGAACAAAATATCCTAAAAAAAATTTACAAAAGTGTAGATAAAGGTGATACTGTAGCTTTAGCTACTATAACTCATAT
TTCAGGATCTACTCCTGGTAAAGCTGGATCAATAATGGCTGTATGGAAAGATGGTAAAATTGAAGGCACTGTAGGGGGCG
GTAAAATTGAACATGAAATCATAAATAAAGCTGTAGCCTGTATTAAAAACAATGAAAACAGTACTTTTGAGTACGAACTA
AGTGAAAATGGAGAATTAGGCATGCAGTGTGGTGGAGAAGCTAGAGGTTTTATAAAAATATTTACCCCTGAAACTAAGCT
CATAATAGTTGGTGCAGGTCACATAGCATTTCATCTCCATAAAATAGCTAAAATTTTAAATTTCTATACAGTAGTAATAG
ATGATAGAAAAGAGTTTGCAAATGAAGACAGATTTCCTAATGCTAATGAAATAATAGTTAAAAAAGTAGATGATGCTTTA
GCCGAGTATTCTATAAATAAAAATACTTATATTGTAATAGTAACAAGAGGTCATAAAGATGATTCTTTAGCTTTAGAAAC
TATAATTTCACAGGATGCAGGTTATATAGGTATGATAGGAAGCTCTAATAAGACATCTTATATTATGAATAATTTACTCT
CTAAGGGCATTTCTAAAGAAAACTTTAAAAAAGTATTTGCCCCTATTGGCTTAGATATAGCCTCTGAAAAACCAGAAGAA
ATAGCTGTTGGCATTTTAAGTGAAATTCTATTAATTAAAAATAACGGAACTTTAAACCATATTAAAAATTTAAAAAATAT
AAACTTTTAA

Upstream 100 bases:

>100_bases
ATTGTTATACTATTTCTGATAAAGCACGAAATATTGCTGGTGGTGTATTAGAAGCTATTTTATATTTTACAAATAAAAAC
ACAGAAAGTAGGTTAAATTT

Downstream 100 bases:

>100_bases
ATATCTTAATAAAAGGAGACTTAGTATGTATAATTTATTTCTTACAGCTCCTAGTGGTACTGGGAAAAGTACCATAATAG
AAAAAGTATTATGTAATTTA

Product: putative xanthine dehydrogenase accessory factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MEQNILKKIYKSVDKGDTVALATITHISGSTPGKAGSIMAVWKDGKIEGTVGGGKIEHEIINKAVACIKNNENSTFEYEL
SENGELGMQCGGEARGFIKIFTPETKLIIVGAGHIAFHLHKIAKILNFYTVVIDDRKEFANEDRFPNANEIIVKKVDDAL
AEYSINKNTYIVIVTRGHKDDSLALETIISQDAGYIGMIGSSNKTSYIMNNLLSKGISKENFKKVFAPIGLDIASEKPEE
IAVGILSEILLIKNNGTLNHIKNLKNINF

Sequences:

>Translated_269_residues
MEQNILKKIYKSVDKGDTVALATITHISGSTPGKAGSIMAVWKDGKIEGTVGGGKIEHEIINKAVACIKNNENSTFEYEL
SENGELGMQCGGEARGFIKIFTPETKLIIVGAGHIAFHLHKIAKILNFYTVVIDDRKEFANEDRFPNANEIIVKKVDDAL
AEYSINKNTYIVIVTRGHKDDSLALETIISQDAGYIGMIGSSNKTSYIMNNLLSKGISKENFKKVFAPIGLDIASEKPEE
IAVGILSEILLIKNNGTLNHIKNLKNINF
>Mature_269_residues
MEQNILKKIYKSVDKGDTVALATITHISGSTPGKAGSIMAVWKDGKIEGTVGGGKIEHEIINKAVACIKNNENSTFEYEL
SENGELGMQCGGEARGFIKIFTPETKLIIVGAGHIAFHLHKIAKILNFYTVVIDDRKEFANEDRFPNANEIIVKKVDDAL
AEYSINKNTYIVIVTRGHKDDSLALETIISQDAGYIGMIGSSNKTSYIMNNLLSKGISKENFKKVFAPIGLDIASEKPEE
IAVGILSEILLIKNNGTLNHIKNLKNINF

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=255, Percent_Identity=30.1960784313725, Blast_Score=141, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 29467; Mature: 29467

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNILKKIYKSVDKGDTVALATITHISGSTPGKAGSIMAVWKDGKIEGTVGGGKIEHEI
CCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHH
INKAVACIKNNENSTFEYELSENGELGMQCGGEARGFIKIFTPETKLIIVGAGHIAFHLH
HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHH
KIAKILNFYTVVIDDRKEFANEDRFPNANEIIVKKVDDALAEYSINKNTYIVIVTRGHKD
HHHHHHHEEEEEEECHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEECCCCC
DSLALETIISQDAGYIGMIGSSNKTSYIMNNLLSKGISKENFKKVFAPIGLDIASEKPEE
CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHH
IAVGILSEILLIKNNGTLNHIKNLKNINF
HHHHHHHEEEEEECCCCHHHHHHHHCCCC
>Mature Secondary Structure
MEQNILKKIYKSVDKGDTVALATITHISGSTPGKAGSIMAVWKDGKIEGTVGGGKIEHEI
CCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHH
INKAVACIKNNENSTFEYELSENGELGMQCGGEARGFIKIFTPETKLIIVGAGHIAFHLH
HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHH
KIAKILNFYTVVIDDRKEFANEDRFPNANEIIVKKVDDALAEYSINKNTYIVIVTRGHKD
HHHHHHHEEEEEEECHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEECCCCC
DSLALETIISQDAGYIGMIGSSNKTSYIMNNLLSKGISKENFKKVFAPIGLDIASEKPEE
CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHH
IAVGILSEILLIKNNGTLNHIKNLKNINF
HHHHHHHEEEEEECCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]