| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226950302
Identifier: 226950302
GI number: 226950302
Start: 3287040
End: 3287933
Strand: Direct
Name: 226950302
Synonym: CLM_3265
Alternate gene names: NA
Gene position: 3287040-3287933 (Clockwise)
Preceding gene: 226950296
Following gene: 226950321
Centisome position: 79.11
GC content: 25.62
Gene sequence:
>894_bases ATGGAACTTACTAAAATTAAAGGAAACTCTTATTATATAAATTTTCCTACAAACATTGGAGTATATATTTTTAAAAATAA AAATTGTTTATTGATTGATACAGGGAAAAATAAATATGATGGAAAAAAAATAGAGGAGGTTTTATTAGAAAATGGACTTC ACCCAAAATATATAGTAAACACTCATAGTCATTTAGATCATTGTGGTGGCAATCTTTTATTCAAAGAAAATTATCCTGGA TGTTTAACCTATACATCCTTCAAAGAAAAACTATTTATGGAAAATCCTGAGTTAAATGCAGCCATGCTATTTTCAGCTTC ACCAATTAAACTTATATATAAAAGCAATAAAAGTATAAATGTAGATTACATATTAGACTATGGTACAAATAAAATTAATG ATGAAAAATTTGAAGCTATAAGTCTTAAAGGCCATTCACCAGAGCAAATAGGATTTATTACCCCTGAAAAGGTATGCTTT TTAGGAGACAGCATTTTTAGTGATGAAACACTAAAGAAATATTCTCTTCCTTATTATTATGATCTAGAAGAATCTATAAA GAGTTTAGAAATTATAAAAAATATAGAGGCAGACTATTTTGTTATAAGTCACTGTGATAGAGTATTAGAAAAAAATGAAA TAATAAATTTAGTGGATAAAAACATGAAAAATATAGAAAAGCATGTAAATATAATTTTAGAACTTTTAGATCAACCTCTA ACTAAAGAAGACATCTTAGAAAACCTTGTAATACTAGAGGATTTAAAACTAAACTTTAATCAATATCACTTATATATCGG TGCTCTGAGTGCTTTTATAACTTACCTTTTCCATGGAAACTTTATTGATTTTTCCCTAGAAGATGGGAAACTTTATTATT TTAAAAAATTATAA
Upstream 100 bases:
>100_bases ATAACAATCTTAAAATTACTATATATTGAAAATGCACTTAATAATATATATATTAAAAATTATCTATTTAATAACAATTA TTTATCAAGGAAGTGATTTT
Downstream 100 bases:
>100_bases GGGAATATCTCAAAATAAAATAGATTTAATTTTAATATTACTAAGATAAGAAATATATCTTTTCTATATTAAAATTAAAT CTATTTTAATATACCATGTT
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Zinc-Dependent Hydrolase; Zinc-Dependent Hydrolase Glyoxylase II Family; Beta-Lactamase-Like; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Zinc Metallohydrolase; Zn-Dependent Hydrolase Glyoxylase II Family; Metallo-Beta-Lactamase; Metallo-Beta-Lactamase Superfamily Protein; Metal-Dependent Hydrolase Beta-Lactamase Superfamily; Zn-Dependent Hydrolase Including Glyoxylase; Zinc Metallohydrolase Glyoxalase II Family
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MELTKIKGNSYYINFPTNIGVYIFKNKNCLLIDTGKNKYDGKKIEEVLLENGLHPKYIVNTHSHLDHCGGNLLFKENYPG CLTYTSFKEKLFMENPELNAAMLFSASPIKLIYKSNKSINVDYILDYGTNKINDEKFEAISLKGHSPEQIGFITPEKVCF LGDSIFSDETLKKYSLPYYYDLEESIKSLEIIKNIEADYFVISHCDRVLEKNEIINLVDKNMKNIEKHVNIILELLDQPL TKEDILENLVILEDLKLNFNQYHLYIGALSAFITYLFHGNFIDFSLEDGKLYYFKKL
Sequences:
>Translated_297_residues MELTKIKGNSYYINFPTNIGVYIFKNKNCLLIDTGKNKYDGKKIEEVLLENGLHPKYIVNTHSHLDHCGGNLLFKENYPG CLTYTSFKEKLFMENPELNAAMLFSASPIKLIYKSNKSINVDYILDYGTNKINDEKFEAISLKGHSPEQIGFITPEKVCF LGDSIFSDETLKKYSLPYYYDLEESIKSLEIIKNIEADYFVISHCDRVLEKNEIINLVDKNMKNIEKHVNIILELLDQPL TKEDILENLVILEDLKLNFNQYHLYIGALSAFITYLFHGNFIDFSLEDGKLYYFKKL >Mature_297_residues MELTKIKGNSYYINFPTNIGVYIFKNKNCLLIDTGKNKYDGKKIEEVLLENGLHPKYIVNTHSHLDHCGGNLLFKENYPG CLTYTSFKEKLFMENPELNAAMLFSASPIKLIYKSNKSINVDYILDYGTNKINDEKFEAISLKGHSPEQIGFITPEKVCF LGDSIFSDETLKKYSLPYYYDLEESIKSLEIIKNIEADYFVISHCDRVLEKNEIINLVDKNMKNIEKHVNIILELLDQPL TKEDILENLVILEDLKLNFNQYHLYIGALSAFITYLFHGNFIDFSLEDGKLYYFKKL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34471; Mature: 34471
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTKIKGNSYYINFPTNIGVYIFKNKNCLLIDTGKNKYDGKKIEEVLLENGLHPKYIVN CCCEEECCCEEEEECCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEE THSHLDHCGGNLLFKENYPGCLTYTSFKEKLFMENPELNAAMLFSASPIKLIYKSNKSIN CCHHHHHCCCEEEEECCCCCEEEEHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCEEE VDYILDYGTNKINDEKFEAISLKGHSPEQIGFITPEKVCFLGDSIFSDETLKKYSLPYYY EEEEEECCCCCCCCCCEEEEEECCCCCCCEECCCCCCEEEECCCCCCCCHHHHHCCCEEE DLEESIKSLEIIKNIEADYFVISHCDRVLEKNEIINLVDKNMKNIEKHVNIILELLDQPL CHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TKEDILENLVILEDLKLNFNQYHLYIGALSAFITYLFHGNFIDFSLEDGKLYYFKKL CHHHHHHHHEEEECCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEC >Mature Secondary Structure MELTKIKGNSYYINFPTNIGVYIFKNKNCLLIDTGKNKYDGKKIEEVLLENGLHPKYIVN CCCEEECCCEEEEECCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEE THSHLDHCGGNLLFKENYPGCLTYTSFKEKLFMENPELNAAMLFSASPIKLIYKSNKSIN CCHHHHHCCCEEEEECCCCCEEEEHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCEEE VDYILDYGTNKINDEKFEAISLKGHSPEQIGFITPEKVCFLGDSIFSDETLKKYSLPYYY EEEEEECCCCCCCCCCEEEEEECCCCCCCEECCCCCCEEEECCCCCCCCHHHHHCCCEEE DLEESIKSLEIIKNIEADYFVISHCDRVLEKNEIINLVDKNMKNIEKHVNIILELLDQPL CHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TKEDILENLVILEDLKLNFNQYHLYIGALSAFITYLFHGNFIDFSLEDGKLYYFKKL CHHHHHHHHEEEECCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA