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The map label for this gene is yfcA [C]

Identifier: 226950296

GI number: 226950296

Start: 3279876

End: 3280628

Strand: Direct

Name: yfcA [C]

Synonym: CLM_3258

Alternate gene names: 226950296

Gene position: 3279876-3280628 (Clockwise)

Preceding gene: 226950295

Following gene: 226950302

Centisome position: 78.93

GC content: 31.47

Gene sequence:

>753_bases
TTGTTTACTATTTTACTTCTATGTTTTGCAGGCTTTTTAGCTGCAATCATAGATGCCATAGCTGGCGGTGGAGGACTAAT
TACTATACCTGCTTATTTAATGGCGGGAGTTCCGCCCCATATGGCCTTAGGCACAAACAAACTTTGTGCTACCTGTTCTT
CATTAACAAGTTGTTTTAATTTTGCTCAATCTGGAAAGATTAATTTGAAGTTATTTAAAATATTAGCTCCTTTTTCATTG
ATAGGTGCTATATTAGGTGTTAACGCAGTAATGGGCATTGATGCTAATTGTCTAAACATTATAGTTCTTATTTTATTAGT
TACAGTAGCCTTATTCAGTTTATTTTCTAAAAATGTAGGCTTAAAAAATAATTTTCATGGACTAAACAAAAAAAATACCC
TACTAGGAATTTTTCTATCTTTTTCTGTAGGTTTTTATACAGGCTTTTTTGGACCTGGTACAGGAGCTTTTATGATGATA
GGATTAATTGGGATTTTTAAGTTTGATTTTGTAGGGGCTAGTGGAAACTCAAAATCATTAACTACTATAAGCAATATGGC
TTCTTTAATATTATTTGCTTTTCATAGGCAAATAAATTATAAGCTAGCCATCCCCGTATCCTTAGCAATGATAATTGGTG
CTAAGCTTGGAACAAAAATAGCTTTAAATAAAGGTTCTAAAGTGATAAAACCAGTCTTTACTACTATATCCATTTTAATA
GCTATAAAAGTATTATACCAAACCATTGCATAA

Upstream 100 bases:

>100_bases
AATGTAGTGAGCGAGTTAAATTCTTCTGATAATATACTTAAACATGATCTTTTAAAAAATAATAAATTAAATTAATTTTA
TAGATTGGAGATGTGTTTTT

Downstream 100 bases:

>100_bases
TACATTGTTCCAATAACTATAGATTAGATATAACTTATTTAAAGGCATTAGCAATGTTAGTAATAGGATGCATAAATCTT
TGCCTTTAGCACTCTATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MFTILLLCFAGFLAAIIDAIAGGGGLITIPAYLMAGVPPHMALGTNKLCATCSSLTSCFNFAQSGKINLKLFKILAPFSL
IGAILGVNAVMGIDANCLNIIVLILLVTVALFSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMI
GLIGIFKFDFVGASGNSKSLTTISNMASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILI
AIKVLYQTIA

Sequences:

>Translated_250_residues
MFTILLLCFAGFLAAIIDAIAGGGGLITIPAYLMAGVPPHMALGTNKLCATCSSLTSCFNFAQSGKINLKLFKILAPFSL
IGAILGVNAVMGIDANCLNIIVLILLVTVALFSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMI
GLIGIFKFDFVGASGNSKSLTTISNMASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILI
AIKVLYQTIA
>Mature_250_residues
MFTILLLCFAGFLAAIIDAIAGGGGLITIPAYLMAGVPPHMALGTNKLCATCSSLTSCFNFAQSGKINLKLFKILAPFSL
IGAILGVNAVMGIDANCLNIIVLILLVTVALFSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMI
GLIGIFKFDFVGASGNSKSLTTISNMASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILI
AIKVLYQTIA

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=247, Percent_Identity=30.7692307692308, Blast_Score=121, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26356; Mature: 26356

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTILLLCFAGFLAAIIDAIAGGGGLITIPAYLMAGVPPHMALGTNKLCATCSSLTSCFN
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHH
FAQSGKINLKLFKILAPFSLIGAILGVNAVMGIDANCLNIIVLILLVTVALFSLFSKNVG
HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGIFKFDFVGASGNSKSL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCH
TTISNMASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILI
HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH
AIKVLYQTIA
HHHHHHHHHC
>Mature Secondary Structure
MFTILLLCFAGFLAAIIDAIAGGGGLITIPAYLMAGVPPHMALGTNKLCATCSSLTSCFN
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHH
FAQSGKINLKLFKILAPFSLIGAILGVNAVMGIDANCLNIIVLILLVTVALFSLFSKNVG
HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGIFKFDFVGASGNSKSL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCH
TTISNMASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILI
HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH
AIKVLYQTIA
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]