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The map label for this gene is nudC [C]

Identifier: 226950238

GI number: 226950238

Start: 3213229

End: 3213666

Strand: Reverse

Name: nudC [C]

Synonym: CLM_3193

Alternate gene names: 226950238

Gene position: 3213666-3213229 (Counterclockwise)

Preceding gene: 226950241

Following gene: 226950237

Centisome position: 77.34

GC content: 36.53

Gene sequence:

>438_bases
ATGGGACAAGTTAAAGAGATTTGTCCAGGAGTAGCTATTGTAATTTTTAACGATAAGAAGCAAGTTTTATTACAGAAAAG
ATCAGATGTGTGTCTTTGGGGTATACCTTCAGGTCATGTAGAACCAGGAGAAACAGTAATCAATGCTGCGATAAGAGAGG
TGCTTGAAGAGACTGGATTAGATGTAGAGGTAGTACGCTTTATTGGAGTATATTCTGATCCAAAGTCTCAAATTTTTGAG
TACCCAGATGGAAGAATAACTCATTTTGTGACTTGTTGTTTTGAAGCAAAAATAATAGGCGGGGAGATTTCCTGTGAGTC
CTCCGAAACTTTAGATTTAAAGTTTTTTCCCATAGATAAATTACCTATAGATATAGTAAAGATGCATCCCAATTGGCTAA
AGGATGCACTGGCTAATGAGGGTCCTTATATTCGATAA

Upstream 100 bases:

>100_bases
TGGAATAAAATGCCCGAGGGGGAAGGTTCAGCGTGTTTTTCATGCGCTGAATTTTTATCTTCTCGGGTTTTTTATATTTT
AAAATAAGGGAGGAGATATT

Downstream 100 bases:

>100_bases
AATATACAAAAGTATTTCTGTGCTGAGTATTTAGAGTGTTAAAAACATATAAAGATAATTTGAATGAAATTTTTTTACGT
GTTTTATAATTTTTTATAAT

Product: MutT/NUDIX family protein

Products: AMP; NMNH. [C]

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MGQVKEICPGVAIVIFNDKKQVLLQKRSDVCLWGIPSGHVEPGETVINAAIREVLEETGLDVEVVRFIGVYSDPKSQIFE
YPDGRITHFVTCCFEAKIIGGEISCESSETLDLKFFPIDKLPIDIVKMHPNWLKDALANEGPYIR

Sequences:

>Translated_145_residues
MGQVKEICPGVAIVIFNDKKQVLLQKRSDVCLWGIPSGHVEPGETVINAAIREVLEETGLDVEVVRFIGVYSDPKSQIFE
YPDGRITHFVTCCFEAKIIGGEISCESSETLDLKFFPIDKLPIDIVKMHPNWLKDALANEGPYIR
>Mature_144_residues
GQVKEICPGVAIVIFNDKKQVLLQKRSDVCLWGIPSGHVEPGETVINAAIREVLEETGLDVEVVRFIGVYSDPKSQIFEY
PDGRITHFVTCCFEAKIIGGEISCESSETLDLKFFPIDKLPIDIVKMHPNWLKDALANEGPYIR

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 16219; Mature: 16088

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVKEICPGVAIVIFNDKKQVLLQKRSDVCLWGIPSGHVEPGETVINAAIREVLEETGL
CCCCHHHCCCEEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
DVEVVRFIGVYSDPKSQIFEYPDGRITHFVTCCFEAKIIGGEISCESSETLDLKFFPIDK
CEEEEEHCCCCCCCHHHHEECCCCCEEEEEEEEHEEEEECCEEECCCCCEEEEEEEECCC
LPIDIVKMHPNWLKDALANEGPYIR
CCEEEEEECCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GQVKEICPGVAIVIFNDKKQVLLQKRSDVCLWGIPSGHVEPGETVINAAIREVLEETGL
CCCHHHCCCEEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
DVEVVRFIGVYSDPKSQIFEYPDGRITHFVTCCFEAKIIGGEISCESSETLDLKFFPIDK
CEEEEEHCCCCCCCHHHHEECCCCCEEEEEEEEHEEEEECCEEECCCCCEEEEEEEECCC
LPIDIVKMHPNWLKDALANEGPYIR
CCEEEEEECCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H2O [C]

Specific reaction: NADH + H2O = AMP + NMNH. [C]

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]