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The map label for this gene is yvaQ [H]

Identifier: 226950237

GI number: 226950237

Start: 3210796

End: 3212508

Strand: Reverse

Name: yvaQ [H]

Synonym: CLM_3191

Alternate gene names: 226950237

Gene position: 3212508-3210796 (Counterclockwise)

Preceding gene: 226950238

Following gene: 226950236

Centisome position: 77.31

GC content: 31.23

Gene sequence:

>1713_bases
ATGTTAAAGAATATAAAAAAGAAAGTGAAAACACAGCTAATTTCTGCTTTTTTAATAGTAGCTGCACTTATTGTTATAGT
AGGGGCTATAGGTGGAGTAGCTCTTAAAAATGTAGCTAGATACGGTGAAAAAATGTATAGTACTAATCTTCAATCTGTTT
ATATGATTACTGATATGAACCAAAATTTGACAGAGATCAAGAGCGATATGTTACAGTTAATATATGAAAAAGATGAATCT
AAGAAAGCTGAATTGATAAAGAATATTCAGAAAAATAAAGATGAAAATACAAAATATCTTGCTGAGTATGAAAAATTACC
AAAGACTGATGAAGAAAATAAAACATTTCAAGCTTTTAAAGATCAATTAAATCAATATAGAACATTAAGAGAAGATGTTA
TAAAATTAGTAGAAGCTAATAATTATGCTCAAGCAGAAAAGCAATATAAAGAAATACCAAAGGTTAGAGATGCTATGTTT
CAGAGTATAAGTAAAATAACTGAAATAAATTTAAACTCGGCTGAATCAGCGAATAATGATATTAATTCAATATATACTAA
ATCTAATATAATTATTGTTATTTTAAGTATAGTTGGTCTTTTAATGGCAATTTTCATAGGATTATTTATTGCAAGGAATA
TAGCAAAGCCTCTTAATAAAATAAAAGATTTAGCAGAGAGATTAGCAAATTATGATTTTTCAACTTCAATTACAGTTGCA
AAAGAAGATGAGTTTGGACAAACAGCTGTAGCTTTAAATACCGCACAGGAAAATGTAAATGGATTGGTTAAGATAATTAT
GGAAAATTCACAGGACATAAGTGCTTCTTCTGAAGAGCTTTCAGCTACTGTAGAGGAATTATCATCAAAAGTGGAAACTA
TAGATACTGCAATAAATAATATTGCAGCAAGTATGCAGGAGTCTAGCGCTGCATCAGAAGAAATTAGCGCATCTGTTGAA
GAAGTAGATTCAAGTGCCAATGAACTATCACAAAAGGCTATGGAAGGAAGTAATAATTCAAATCAATTTAAAGAAAGAGC
CACAGAAGTTAAAAAGAATAGCCAAAAAGCTATAGAAGAATCACGAAAAATACACTTAGAAAAGAAAAGTAATATGGAAA
GGGCTGTTGAAGAAGGTAGAGTCGTTGATAGTATCAAGGTTATGGCAGACACTATAGCAAGTATTGCGGAACAGACTAAT
TTACTTGCGCTAAATGCAGCAATAGAAGCAGCACGAGCAGGAGAACAGGGAAAAGGTTTTGCAGTAGTTGCTGAAGAAGT
AAGAAAGCTTGCAGAACAGTCAAAAGATGCTGTATTAAGCATTCAAGAAACTATAGTTAAAGTACAAGGCGCATTTAAGA
GTAGCATTAATACAGGTAGTGATATATTGGAATTCATAAATACACAAGTAATGGAACAATTTGATGCTTATGGAGAGACA
GGTAGTCAATATTATGATGATTCTGATTTTGTAAGTAAAATGTCCGAGGAAATTGCAGCTATGTCTGAAGAAGTTACAGC
AACATTAGGACAAGTAAGTGGAGCAGTGCAGAATATGGCAATATCTGCTCAAAAGTCTAATGAGGAAGCAGATATAATAA
AAGATAGCATGAATGAAACAACTAAAGCTATAGAACAAGTAGCAGAAACGGCTGAAAGTCAAGCAGAACTTGCTGAAAAT
TTAAATGAAATGGTGCATAAATTTAAATTATAA

Upstream 100 bases:

>100_bases
AAAAAACTAAAGAAATTATACAAAAATTTAAAGATGAAAAGAAATATAGATGTTTTTACAAACTTAAATTTATAATAATT
TGATGAGGAGAGGGTGAACT

Downstream 100 bases:

>100_bases
GTTGAAAATTTTAGAACTATAATAAAAGGCTATGAGGAATTTTAATTAATAAGCTCATAGTCTTTTGTATAGAAATAAGA
AATTACAACATTTAGATTAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MLKNIKKKVKTQLISAFLIVAALIVIVGAIGGVALKNVARYGEKMYSTNLQSVYMITDMNQNLTEIKSDMLQLIYEKDES
KKAELIKNIQKNKDENTKYLAEYEKLPKTDEENKTFQAFKDQLNQYRTLREDVIKLVEANNYAQAEKQYKEIPKVRDAMF
QSISKITEINLNSAESANNDINSIYTKSNIIIVILSIVGLLMAIFIGLFIARNIAKPLNKIKDLAERLANYDFSTSITVA
KEDEFGQTAVALNTAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINNIAASMQESSAASEEISASVE
EVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEESRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTN
LLALNAAIEAARAGEQGKGFAVVAEEVRKLAEQSKDAVLSIQETIVKVQGAFKSSINTGSDILEFINTQVMEQFDAYGET
GSQYYDDSDFVSKMSEEIAAMSEEVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNETTKAIEQVAETAESQAELAEN
LNEMVHKFKL

Sequences:

>Translated_570_residues
MLKNIKKKVKTQLISAFLIVAALIVIVGAIGGVALKNVARYGEKMYSTNLQSVYMITDMNQNLTEIKSDMLQLIYEKDES
KKAELIKNIQKNKDENTKYLAEYEKLPKTDEENKTFQAFKDQLNQYRTLREDVIKLVEANNYAQAEKQYKEIPKVRDAMF
QSISKITEINLNSAESANNDINSIYTKSNIIIVILSIVGLLMAIFIGLFIARNIAKPLNKIKDLAERLANYDFSTSITVA
KEDEFGQTAVALNTAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINNIAASMQESSAASEEISASVE
EVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEESRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTN
LLALNAAIEAARAGEQGKGFAVVAEEVRKLAEQSKDAVLSIQETIVKVQGAFKSSINTGSDILEFINTQVMEQFDAYGET
GSQYYDDSDFVSKMSEEIAAMSEEVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNETTKAIEQVAETAESQAELAEN
LNEMVHKFKL
>Mature_570_residues
MLKNIKKKVKTQLISAFLIVAALIVIVGAIGGVALKNVARYGEKMYSTNLQSVYMITDMNQNLTEIKSDMLQLIYEKDES
KKAELIKNIQKNKDENTKYLAEYEKLPKTDEENKTFQAFKDQLNQYRTLREDVIKLVEANNYAQAEKQYKEIPKVRDAMF
QSISKITEINLNSAESANNDINSIYTKSNIIIVILSIVGLLMAIFIGLFIARNIAKPLNKIKDLAERLANYDFSTSITVA
KEDEFGQTAVALNTAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINNIAASMQESSAASEEISASVE
EVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEESRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTN
LLALNAAIEAARAGEQGKGFAVVAEEVRKLAEQSKDAVLSIQETIVKVQGAFKSSINTGSDILEFINTQVMEQFDAYGET
GSQYYDDSDFVSKMSEEIAAMSEEVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNETTKAIEQVAETAESQAELAEN
LNEMVHKFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=445, Percent_Identity=28.0898876404494, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787690, Length=326, Percent_Identity=30.9815950920245, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1788195, Length=310, Percent_Identity=31.9354838709677, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1788194, Length=320, Percent_Identity=29.0625, Blast_Score=93, Evalue=6e-20,
Organism=Escherichia coli, GI1789453, Length=548, Percent_Identity=23.1751824817518, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62912; Mature: 62912

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNIKKKVKTQLISAFLIVAALIVIVGAIGGVALKNVARYGEKMYSTNLQSVYMITDMN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
QNLTEIKSDMLQLIYEKDESKKAELIKNIQKNKDENTKYLAEYEKLPKTDEENKTFQAFK
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
DQLNQYRTLREDVIKLVEANNYAQAEKQYKEIPKVRDAMFQSISKITEINLNSAESANND
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
INSIYTKSNIIIVILSIVGLLMAIFIGLFIARNIAKPLNKIKDLAERLANYDFSTSITVA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
KEDEFGQTAVALNTAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINN
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAASMQESSAASEEISASVEEVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTNLLALNAAIEAARAGEQGKGF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVAEEVRKLAEQSKDAVLSIQETIVKVQGAFKSSINTGSDILEFINTQVMEQFDAYGET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GSQYYDDSDFVSKMSEEIAAMSEEVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TKAIEQVAETAESQAELAENLNEMVHKFKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKNIKKKVKTQLISAFLIVAALIVIVGAIGGVALKNVARYGEKMYSTNLQSVYMITDMN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
QNLTEIKSDMLQLIYEKDESKKAELIKNIQKNKDENTKYLAEYEKLPKTDEENKTFQAFK
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
DQLNQYRTLREDVIKLVEANNYAQAEKQYKEIPKVRDAMFQSISKITEINLNSAESANND
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
INSIYTKSNIIIVILSIVGLLMAIFIGLFIARNIAKPLNKIKDLAERLANYDFSTSITVA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
KEDEFGQTAVALNTAQENVNGLVKIIMENSQDISASSEELSATVEELSSKVETIDTAINN
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAASMQESSAASEEISASVEEVDSSANELSQKAMEGSNNSNQFKERATEVKKNSQKAIEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SRKIHLEKKSNMERAVEEGRVVDSIKVMADTIASIAEQTNLLALNAAIEAARAGEQGKGF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVAEEVRKLAEQSKDAVLSIQETIVKVQGAFKSSINTGSDILEFINTQVMEQFDAYGET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GSQYYDDSDFVSKMSEEIAAMSEEVTATLGQVSGAVQNMAISAQKSNEEADIIKDSMNET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TKAIEQVAETAESQAELAENLNEMVHKFKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]