Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is ybjQ [C]
Identifier: 226950198
GI number: 226950198
Start: 3163645
End: 3163965
Strand: Direct
Name: ybjQ [C]
Synonym: CLM_3152
Alternate gene names: 226950198
Gene position: 3163645-3163965 (Clockwise)
Preceding gene: 226950195
Following gene: 226950204
Centisome position: 76.14
GC content: 36.45
Gene sequence:
>321_bases ATGCTAATTACTACTACTAACAACATAGAGGGTAAACAAATAAAACAATATAAAGGAATAGTCTGTGGTGAAGTTATTAC AGGAGTTAATTTTCTAAAAGATTTTATGGCTGGAATAAGAGACTTAGTAGGCGGAAGATCTCAAGGCTATGAAGAAGAGT TAATTCGGGCAAGAAATGAAGCTATAGATGAAATGAGGGATAGAGCTGCTTCATTGGGTTGTAATGCAATAGTAGGCGTA GATATAGATTATGAAGTTTTAGGTCAGGGCGGAGGAATGCTTATGGTAACAGCTTCCGGTACTGGTGTTGTAACTGAATA A
Upstream 100 bases:
>100_bases TAAAATAACATCACTTTAAAGAATTTTTAATATTATTTTTGAAGGATTTACATAAACTATATAGACTTATTTCTATAATA ATTTTTAGGAGGATTTAATT
Downstream 100 bases:
>100_bases CAATTAACCTAATTTTTAATATAAAAAAATGCTAGTAATATTAACTTAGTTATTAATTACTAGCACTTTTTATATCATTA ATTACAATATATTATAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MLITTTNNIEGKQIKQYKGIVCGEVITGVNFLKDFMAGIRDLVGGRSQGYEEELIRARNEAIDEMRDRAASLGCNAIVGV DIDYEVLGQGGGMLMVTASGTGVVTE
Sequences:
>Translated_106_residues MLITTTNNIEGKQIKQYKGIVCGEVITGVNFLKDFMAGIRDLVGGRSQGYEEELIRARNEAIDEMRDRAASLGCNAIVGV DIDYEVLGQGGGMLMVTASGTGVVTE >Mature_106_residues MLITTTNNIEGKQIKQYKGIVCGEVITGVNFLKDFMAGIRDLVGGRSQGYEEELIRARNEAIDEMRDRAASLGCNAIVGV DIDYEVLGQGGGMLMVTASGTGVVTE
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family [H]
Homologues:
Organism=Escherichia coli, GI1787091, Length=105, Percent_Identity=54.2857142857143, Blast_Score=117, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002765 [H]
Pfam domain/function: PF01906 DUF74 [H]
EC number: NA
Molecular weight: Translated: 11344; Mature: 11344
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITTTNNIEGKQIKQYKGIVCGEVITGVNFLKDFMAGIRDLVGGRSQGYEEELIRARNE CEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIDEMRDRAASLGCNAIVGVDIDYEVLGQGGGMLMVTASGTGVVTE HHHHHHHHHHHCCCCEEEECCCCHHEECCCCCEEEEEECCCCCCCC >Mature Secondary Structure MLITTTNNIEGKQIKQYKGIVCGEVITGVNFLKDFMAGIRDLVGGRSQGYEEELIRARNE CEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIDEMRDRAASLGCNAIVGVDIDYEVLGQGGGMLMVTASGTGVVTE HHHHHHHHHHHCCCCEEEECCCCHHEECCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA