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The map label for this gene is yheN [H]

Identifier: 226950189

GI number: 226950189

Start: 3150370

End: 3151263

Strand: Direct

Name: yheN [H]

Synonym: CLM_3143

Alternate gene names: 226950189

Gene position: 3150370-3151263 (Clockwise)

Preceding gene: 226950188

Following gene: 226950195

Centisome position: 75.82

GC content: 27.63

Gene sequence:

>894_bases
ATGAGAAATTCTAGAAAAAATATTTACAGCAAAAAAAGGCACCATGATTTAAGAAACACAGTAACTATATGTTTATTATT
CTTTTCAATCTTAAGCACTTTTATAACCGGTGGAAGGCTTTTAAAAGTTAAAATTCAGAGTAACATGTTAGCAAAAAAAA
TTACTAATATGTCTTCAGAAAATAAAAATATAAAAAATGAAAATATAAAACTTATGTCTGATATAGATAAAGAAAATGAA
ACGTATAAAGAAAAAATGAAGCATATAAAAATAGCATATTTAACCTTTGATGATGGCCCATCTAAAAACACTATGGAAAT
ATTAAAAATATTAAAAGAAAATGATGTTAGAGCTACATTCTTTGTTAATGGACATCCAGGTTTAGAAAATTTGTATAAAG
CTATAGCAAAAGATGGACATGTTATAGCTAATCATACCTATAGTCATGACTATAGCAAAGTTTATATGTCTCCTGAAAAC
TTTGAAAAAGATATAAAAAAATTAGACAAATATATTGAGGAAACTATTGGTCAAAAACCAAGTCATATTATTAGATACCC
TGGTGGTTCTAATAATACAGTAAGCCATAACTATGGCGGTCCTGGTGTAATGAAACAAATAATACCTCATATGAATAAAT
TAGGTTACATACATTTTGATTGGAATGTAGATTCAACTGATGCTTCAGCTTTTCGTCAAAGAAAAGATAAGATTATAAAT
TCTGTTTTAACTGAAAGCCGTGGTCAACATAAAGCCGTAATATTAATGCATGATACTGATCCTAAAACCACAACTGTACA
AGCTTTACCAGAAGTAATAAAGGGCTTAAAAGAGCAAGGATTTATATTTGATGTAATAACTAAAGATACTCCAAAAACAA
GCTTTACGAAATAA

Upstream 100 bases:

>100_bases
AAATTAAGTTCGGAAAAAGAACAGTTAGATAAAAAACATAAAGAAATAAAAAATAAAATTTCTACTTTAAAAGGAGTTTA
ATAAAGACGAGGGGTTGGCT

Downstream 100 bases:

>100_bases
GGAAAGTGCTATACACTTTCCTTATTTTGTTACATTCCTGGAGTTTTTTCATTCTACACATACTATATTACTATTTTTTT
ATTATAAAACTTCCTGCTTT

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MRNSRKNIYSKKRHHDLRNTVTICLLFFSILSTFITGGRLLKVKIQSNMLAKKITNMSSENKNIKNENIKLMSDIDKENE
TYKEKMKHIKIAYLTFDDGPSKNTMEILKILKENDVRATFFVNGHPGLENLYKAIAKDGHVIANHTYSHDYSKVYMSPEN
FEKDIKKLDKYIEETIGQKPSHIIRYPGGSNNTVSHNYGGPGVMKQIIPHMNKLGYIHFDWNVDSTDASAFRQRKDKIIN
SVLTESRGQHKAVILMHDTDPKTTTVQALPEVIKGLKEQGFIFDVITKDTPKTSFTK

Sequences:

>Translated_297_residues
MRNSRKNIYSKKRHHDLRNTVTICLLFFSILSTFITGGRLLKVKIQSNMLAKKITNMSSENKNIKNENIKLMSDIDKENE
TYKEKMKHIKIAYLTFDDGPSKNTMEILKILKENDVRATFFVNGHPGLENLYKAIAKDGHVIANHTYSHDYSKVYMSPEN
FEKDIKKLDKYIEETIGQKPSHIIRYPGGSNNTVSHNYGGPGVMKQIIPHMNKLGYIHFDWNVDSTDASAFRQRKDKIIN
SVLTESRGQHKAVILMHDTDPKTTTVQALPEVIKGLKEQGFIFDVITKDTPKTSFTK
>Mature_297_residues
MRNSRKNIYSKKRHHDLRNTVTICLLFFSILSTFITGGRLLKVKIQSNMLAKKITNMSSENKNIKNENIKLMSDIDKENE
TYKEKMKHIKIAYLTFDDGPSKNTMEILKILKENDVRATFFVNGHPGLENLYKAIAKDGHVIANHTYSHDYSKVYMSPEN
FEKDIKKLDKYIEETIGQKPSHIIRYPGGSNNTVSHNYGGPGVMKQIIPHMNKLGYIHFDWNVDSTDASAFRQRKDKIIN
SVLTESRGQHKAVILMHDTDPKTTTVQALPEVIKGLKEQGFIFDVITKDTPKTSFTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 34064; Mature: 34064

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSRKNIYSKKRHHDLRNTVTICLLFFSILSTFITGGRLLKVKIQSNMLAKKITNMSSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCC
NKNIKNENIKLMSDIDKENETYKEKMKHIKIAYLTFDDGPSKNTMEILKILKENDVRATF
CCCCCCCCCCEEHHCCCCHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEE
FVNGHPGLENLYKAIAKDGHVIANHTYSHDYSKVYMSPENFEKDIKKLDKYIEETIGQKP
EECCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCC
SHIIRYPGGSNNTVSHNYGGPGVMKQIIPHMNKLGYIHFDWNVDSTDASAFRQRKDKIIN
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHH
SVLTESRGQHKAVILMHDTDPKTTTVQALPEVIKGLKEQGFIFDVITKDTPKTSFTK
HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRNSRKNIYSKKRHHDLRNTVTICLLFFSILSTFITGGRLLKVKIQSNMLAKKITNMSSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCC
NKNIKNENIKLMSDIDKENETYKEKMKHIKIAYLTFDDGPSKNTMEILKILKENDVRATF
CCCCCCCCCCEEHHCCCCHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEE
FVNGHPGLENLYKAIAKDGHVIANHTYSHDYSKVYMSPENFEKDIKKLDKYIEETIGQKP
EECCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCC
SHIIRYPGGSNNTVSHNYGGPGVMKQIIPHMNKLGYIHFDWNVDSTDASAFRQRKDKIIN
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHH
SVLTESRGQHKAVILMHDTDPKTTTVQALPEVIKGLKEQGFIFDVITKDTPKTSFTK
HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]