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The map label for this gene is 226949447

Identifier: 226949447

GI number: 226949447

Start: 2453703

End: 2454500

Strand: Reverse

Name: 226949447

Synonym: CLM_2377

Alternate gene names: NA

Gene position: 2454500-2453703 (Counterclockwise)

Preceding gene: 226949448

Following gene: 226949446

Centisome position: 59.07

GC content: 31.33

Gene sequence:

>798_bases
ATGAGATATAGTATTACAGATTTAGCAGAAATTCTTGGATGCACCACAAGTGCTATTCACTATTTTGAAAAAGAACATTT
GATTAAAGTGGAAAAAGGAAAAAATGGTCATCGCTACTATAATGTTGTAGATGTATTTCGATTGCTTTCTTATACAAAGT
ATCGTTCTATGGAAATACCTATGAAAACTATCATTGCACAATTTGGTGGGGAAGAAAATAACTATAAATTAATAGAAGAA
AGAGAAGCAATGTATCAATTAGAAGCCTTAAAAAGGGCCCAATATTACATGAATTTAGCAGATGCTATTGGGGAACATCT
TGTTAGCATAAGAAGAATTGAAGAACTATTGAATAAATATGAATTTGCAAAGTCACCTGAAGTAACGATTATGTGTGATG
ATGAGTGTGGATGGCTTTCAAAAAAGCGTAGTTCCCAAAGAATAATTCATGAATGGGTAAAAGCAATGCCTACAGTACAA
TTGGGAGTATTTGATTCAAGAATGGGAATAAGTAATTTTGGATATTTAGTAAAAACCAAAAAGAGAGAAGAATTGGAGCT
TCCATTAGGTTTATACACAAAACAATTAAAAAGCACCTCTTGTATACATACAATTGTAATGGCAGATGAGGATTTTACAC
AACATCCTCAGAAAGTTTTTAAAAAGGCTTCTGAATTTGCAATAAAAAAAGGTCTTGAAATAGGTGAAATAGCCTGGGGA
AAGATATTATTAGTTGAGGTTGAAAAGGGAGCTAAATTGCATCCATATATAGAATTATGGATTTCGATAAAAATATAA

Upstream 100 bases:

>100_bases
ATTGTTACTAATTAAAGGAATAGTAAATTATTTTAATAGAGCAGCAGGATAATCTTTTTAACAAATACCTAAAGTGACTT
TAGGAAGAAAGGAGCAAATT

Downstream 100 bases:

>100_bases
CAATATCCTCTTGAAAGTAAAGCTACTTTATGCTCTATACTGAAGGTAACAAGAAAATAAAAAAATACAAATGTGAATTC
AGAAAGGAGAAAGAAAATGA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRYSITDLAEILGCTTSAIHYFEKEHLIKVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEE
REAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQ
LGVFDSRMGISNFGYLVKTKKREELELPLGLYTKQLKSTSCIHTIVMADEDFTQHPQKVFKKASEFAIKKGLEIGEIAWG
KILLVEVEKGAKLHPYIELWISIKI

Sequences:

>Translated_265_residues
MRYSITDLAEILGCTTSAIHYFEKEHLIKVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEE
REAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQ
LGVFDSRMGISNFGYLVKTKKREELELPLGLYTKQLKSTSCIHTIVMADEDFTQHPQKVFKKASEFAIKKGLEIGEIAWG
KILLVEVEKGAKLHPYIELWISIKI
>Mature_265_residues
MRYSITDLAEILGCTTSAIHYFEKEHLIKVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEE
REAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQ
LGVFDSRMGISNFGYLVKTKKREELELPLGLYTKQLKSTSCIHTIVMADEDFTQHPQKVFKKASEFAIKKGLEIGEIAWG
KILLVEVEKGAKLHPYIELWISIKI

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30827; Mature: 30827

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSITDLAEILGCTTSAIHYFEKEHLIKVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIP
CCCCHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
MKTIIAQFGGEENNYKLIEEREAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKY
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQLGVFDSRMGISNFGYLVKTK
HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEC
KREELELPLGLYTKQLKSTSCIHTIVMADEDFTQHPQKVFKKASEFAIKKGLEIGEIAWG
CCHHCCCCHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KILLVEVEKGAKLHPYIELWISIKI
EEEEEEECCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MRYSITDLAEILGCTTSAIHYFEKEHLIKVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIP
CCCCHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
MKTIIAQFGGEENNYKLIEEREAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKY
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQLGVFDSRMGISNFGYLVKTK
HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEC
KREELELPLGLYTKQLKSTSCIHTIVMADEDFTQHPQKVFKKASEFAIKKGLEIGEIAWG
CCHHCCCCHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KILLVEVEKGAKLHPYIELWISIKI
EEEEEEECCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA