| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949417
Identifier: 226949417
GI number: 226949417
Start: 2417168
End: 2419897
Strand: Reverse
Name: 226949417
Synonym: CLM_2345
Alternate gene names: NA
Gene position: 2419897-2417168 (Counterclockwise)
Preceding gene: 226949418
Following gene: 226949416
Centisome position: 58.24
GC content: 33.74
Gene sequence:
>2730_bases ATGAAATCTAAGAAATTAAAATTATCATTGTTATTGTGTGCTTATGCATTGTGTTCAATGTTATTAGCAAGGCCTGTCAA AGCAGATGTTGGAGTTGTTAAGGGTGCTACACCTATTAATCAAGGTATGGCTATTCACGCAGACGACTTTACAATATACA ATGATAAAATTGCTGCATCTTTTGCAGTAGGAACAAATAACTACTGGAACATGACAAATGGAAGTATCCTTGATGTTGCT ATTATGAAAGATGGCAAATTTGGTGTTGATTTAGTAAATGATATTGAATTTCTAAACAATTACTGGACAGCTACAGGAGC ATTTAATGGTGAAAATCTACAGAAAAATCCAAAGGAAAATATTACATACAAAAAAGAAGAGAATAAGGTTGTTGTTACTG CGAAAACAAGATATTGGACAGCAGGACATAAATTACCTTTAAATGTCACAATTGAGTATACATTAGAAGATGGTAAAAAT TATATTGGTTTAAAAACAACTGTTGAAAATCCAGCAGGAAATGATGTTTATGAAAACATGTATGGAGGATATTCAGTTAG TACTTTAGCTGCTAGCACTTTTGGACCTTTTGGATATTATCCTGACAAAAAAATAACTGGTATCGGAATTGGTGCTGATA AAGATGTTAATGAGAGATTTGGAAATTACGTTGTAACTTATGATAAAAATTATGCTGTTTCCGTTCAATTAGATGGGGCA AATACATATAAAGGGTCAAGTGGATATAAGGATGTCTATGTAAATAATACAATTGAACCAGGAAAGAGCTGTATTTATAC AGGTGAAATTTTAGTATCAGATAAAGGTGAAACAACACCTATTATTGAACGTTTCATGGAAAAAGATAAAACAATTCAAT CAGCAAATGTAAACGGTGTAGTTAAGGATTCGAAGGGGAATCCTGTAAAAGATGCATTTGTAGTAATTAGTAAAAAAGGT TCTTATAAAGAAACTGTAAAATCTCATGGTAAAGAACAACTTAAAAAAGATATTATGCAGCCATTTGCTTGGAAAATAAC AGATGAAAATGGTCACTTTGAATTTGATTTACCAAAAGATGAATATGAGGTTCATGTTGAAGCTAAGGGATATACACCGT CAGATATTAAGAAGTTAAACCTAACAGAAAATTCAACCTTAGATTTTATAGTTAAAGATGGAGCTCACGCTTCTCTTAAA GCTGTTGATGAAAATGGAAATCCAGTTGATTTCAAGGTAACTGTATCAGGAATTACATCAACATTTAAAACACTTGGGGG AACTGTATTCTTTACGGATCCAAAAACACATGAAGCTAAATTTGATGTATCAGCTCCTGAGAATCCTGTAACGTTTACAA TTACACGTGCCAGTGATTATGAATCACTTCCAGCTACAATAACAAAAACAATAAAGCCGGGTGAAACGCTTGATGAAAAA GTTGTACTTCCTACATTAATAAAGACAAATTCAAGAAATTGGTATAGTATGGACAACCATCAACATGCAGATTTTGGTGA TGGTGCAACACCAGTTAAAGAACTATATAAAGCTCAAGTTGCAGCAGGTTTAAATTATAACCTTGTTTCTGATCATGATG CAGTAGTAAATGATCCTCTTATGGCTGAATTAGCTAAAGAAGGTAGCAGACCATTTATTCCAAGTATTGAAGTTTCTCCA GGTTGGGGTCATTGGGGTATTTTAGGTGCTGATTATACAAAGAATCCGATTTCTCCAGACTTAACTCCAGCAGAAATAAT TAAAGCTGGACATGATATGGGTGCTCTTGTAGTTGTTAATCATCCATATACAGAATATGGTTTCTTCTATAATAGAGATA GTGTTAAAGGTGGATATGATGAAGGTACTGAAGATTTCGATTTACTTGAATTACAATCTACAATTGATTTAACTGATAGT ACTAACATGGATAAAAGAGCATTAGATTCTGCAATGGGATATTGGAATAAAGGTATTAAAAAATACTTAAGTGCAGGTTC AGATCAGCACGATGTAACTTCAGGATTATACCCAGGAATTATCAGATTATATGCTAATATTGAGGGGAAAAATACAACTG AAAAGTATCTTAAAGCAATAAAAGATGGTCATAGTTATGTAACAATGGGACCTATATTTACACCAAAAGCAAACACAATG TTTGGTACAACACAAAAAGTTAATGCAGGTGAAAAACACACATTAAATACAGAAATTCAAGCTGTTAATGGATTAAATCA TATTGACGTTTACAGCGAAGGTAAGATTATTGCATCAAAAGACTTTAATAATACACAAGATGCTGTTAACTATACACTAG ATGTAAAACCAACAAAAAACACATGGTATAGTTTTGTTGCAACTGATGGAAAAGGTCACTATGCAGTTACAAATCCTATT TGGGTAGACATTGCAGATGATACTGACAAACTAGGGTCAACAGACAAACCAGGGTCAACAGACAAACCAGGGTCAACAGA CAAACCAGGATCAACAGACAAACCAGGATCAGCAGACAAACCAGGGTCAACAGACAAACCGGGGTCAGCAGAAAAACCAG GTTCAACAGAAAAACCAGGGTCAAATGAAGGGAAAAAAGTAACTACAGCTGGAAAATGGAAACTTCCAAATACTGCTACA CATGTATACGGAATATTACTAGCAGGTTCTGTATTAGCACTACTAGGCGCAGGTGGATTTGTATTTAAAAAGCGTCATAA ACATGAGTAA
Upstream 100 bases:
>100_bases TTTTATTAACTCAAATATTAAATAGAAACAAATTAACTTTGATTGTTAATTTTTAAATTAACATAAAATTTTTTATTATC AGAATTAAGGGGGCATAATT
Downstream 100 bases:
>100_bases ATTTAAGTTATCATTTAAAGAGTTATCATTAGTAAAAATCTTAAGTCTAGGAACTATAGTACTAGGCTTAGGATGTATTT CTTGGTCATTAATTAATATA
Product: LPXTG-motif cell wall anchor domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 909; Mature: 909
Protein sequence:
>909_residues MKSKKLKLSLLLCAYALCSMLLARPVKADVGVVKGATPINQGMAIHADDFTIYNDKIAASFAVGTNNYWNMTNGSILDVA IMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKENITYKKEENKVVVTAKTRYWTAGHKLPLNVTIEYTLEDGKN YIGLKTTVENPAGNDVYENMYGGYSVSTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFMEKDKTIQSANVNGVVKDSKGNPVKDAFVVISKKG SYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKDEYEVHVEAKGYTPSDIKKLNLTENSTLDFIVKDGAHASLK AVDENGNPVDFKVTVSGITSTFKTLGGTVFFTDPKTHEAKFDVSAPENPVTFTITRASDYESLPATITKTIKPGETLDEK VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPLMAELAKEGSRPFIPSIEVSP GWGHWGILGADYTKNPISPDLTPAEIIKAGHDMGALVVVNHPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDS TNMDKRALDSAMGYWNKGIKKYLSAGSDQHDVTSGLYPGIIRLYANIEGKNTTEKYLKAIKDGHSYVTMGPIFTPKANTM FGTTQKVNAGEKHTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKNTWYSFVATDGKGHYAVTNPI WVDIADDTDKLGSTDKPGSTDKPGSTDKPGSTDKPGSADKPGSTDKPGSAEKPGSTEKPGSNEGKKVTTAGKWKLPNTAT HVYGILLAGSVLALLGAGGFVFKKRHKHE
Sequences:
>Translated_909_residues MKSKKLKLSLLLCAYALCSMLLARPVKADVGVVKGATPINQGMAIHADDFTIYNDKIAASFAVGTNNYWNMTNGSILDVA IMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKENITYKKEENKVVVTAKTRYWTAGHKLPLNVTIEYTLEDGKN YIGLKTTVENPAGNDVYENMYGGYSVSTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFMEKDKTIQSANVNGVVKDSKGNPVKDAFVVISKKG SYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKDEYEVHVEAKGYTPSDIKKLNLTENSTLDFIVKDGAHASLK AVDENGNPVDFKVTVSGITSTFKTLGGTVFFTDPKTHEAKFDVSAPENPVTFTITRASDYESLPATITKTIKPGETLDEK VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPLMAELAKEGSRPFIPSIEVSP GWGHWGILGADYTKNPISPDLTPAEIIKAGHDMGALVVVNHPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDS TNMDKRALDSAMGYWNKGIKKYLSAGSDQHDVTSGLYPGIIRLYANIEGKNTTEKYLKAIKDGHSYVTMGPIFTPKANTM FGTTQKVNAGEKHTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKNTWYSFVATDGKGHYAVTNPI WVDIADDTDKLGSTDKPGSTDKPGSTDKPGSTDKPGSADKPGSTDKPGSAEKPGSTEKPGSNEGKKVTTAGKWKLPNTAT HVYGILLAGSVLALLGAGGFVFKKRHKHE >Mature_909_residues MKSKKLKLSLLLCAYALCSMLLARPVKADVGVVKGATPINQGMAIHADDFTIYNDKIAASFAVGTNNYWNMTNGSILDVA IMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKENITYKKEENKVVVTAKTRYWTAGHKLPLNVTIEYTLEDGKN YIGLKTTVENPAGNDVYENMYGGYSVSTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFMEKDKTIQSANVNGVVKDSKGNPVKDAFVVISKKG SYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKDEYEVHVEAKGYTPSDIKKLNLTENSTLDFIVKDGAHASLK AVDENGNPVDFKVTVSGITSTFKTLGGTVFFTDPKTHEAKFDVSAPENPVTFTITRASDYESLPATITKTIKPGETLDEK VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPLMAELAKEGSRPFIPSIEVSP GWGHWGILGADYTKNPISPDLTPAEIIKAGHDMGALVVVNHPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDS TNMDKRALDSAMGYWNKGIKKYLSAGSDQHDVTSGLYPGIIRLYANIEGKNTTEKYLKAIKDGHSYVTMGPIFTPKANTM FGTTQKVNAGEKHTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKNTWYSFVATDGKGHYAVTNPI WVDIADDTDKLGSTDKPGSTDKPGSTDKPGSTDKPGSADKPGSTDKPGSAEKPGSTEKPGSNEGKKVTTAGKWKLPNTAT HVYGILLAGSVLALLGAGGFVFKKRHKHE
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99266; Mature: 99266
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKKLKLSLLLCAYALCSMLLARPVKADVGVVKGATPINQGMAIHADDFTIYNDKIAAS CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECCEEEECCCEEEE FAVGTNNYWNMTNGSILDVAIMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKEN EEECCCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC ITYKKEENKVVVTAKTRYWTAGHKLPLNVTIEYTLEDGKNYIGLKTTVENPAGNDVYENM CCEEECCCEEEEEEECEEEECCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCHHHHHH YGGYSVSTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA CCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEECCCEEEEEEECCC NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFMEKDKTIQSANVNGV CCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCEE VKDSKGNPVKDAFVVISKKGSYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKD EECCCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCEEEECCCC EYEVHVEAKGYTPSDIKKLNLTENSTLDFIVKDGAHASLKAVDENGNPVDFKVTVSGITS CEEEEEEECCCCHHHCEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEECHHHH TFKTLGGTVFFTDPKTHEAKFDVSAPENPVTFTITRASDYESLPATITKTIKPGETLDEK HHHHHCCEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHEECCCCCCCCCCC VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPL EEEEHEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH MAELAKEGSRPFIPSIEVSPGWGHWGILGADYTKNPISPDLTPAEIIKAGHDMGALVVVN HHHHHHCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEE HPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDSTNMDKRALDSAMGYWNKGIK CCCHHHCEEECCCCCCCCCCCCCCCCEEEEEHHHEECCCCCCCHHHHHHHHHHHHHHHHH KYLSAGSDQHDVTSGLYPGIIRLYANIEGKNTTEKYLKAIKDGHSYVTMGPIFTPKANTM HHHHCCCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCEECCCCCCE FGTTQKVNAGEKHTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKN ECCCCCCCCCCCEECCCEEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCC TWYSFVATDGKGHYAVTNPIWVDIADDTDKLGSTDKPGSTDKPGSTDKPGSTDKPGSADK CEEEEEEECCCCCEEECCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGSTDKPGSAEKPGSTEKPGSNEGKKVTTAGKWKLPNTATHVYGILLAGSVLALLGAGGF CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHCCCCC VFKKRHKHE EECCCCCCC >Mature Secondary Structure MKSKKLKLSLLLCAYALCSMLLARPVKADVGVVKGATPINQGMAIHADDFTIYNDKIAAS CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECCEEEECCCEEEE FAVGTNNYWNMTNGSILDVAIMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKEN EEECCCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC ITYKKEENKVVVTAKTRYWTAGHKLPLNVTIEYTLEDGKNYIGLKTTVENPAGNDVYENM CCEEECCCEEEEEEECEEEECCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCHHHHHH YGGYSVSTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA CCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEECCCEEEEEEECCC NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFMEKDKTIQSANVNGV CCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCEE VKDSKGNPVKDAFVVISKKGSYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKD EECCCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCEEEECCCC EYEVHVEAKGYTPSDIKKLNLTENSTLDFIVKDGAHASLKAVDENGNPVDFKVTVSGITS CEEEEEEECCCCHHHCEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEECHHHH TFKTLGGTVFFTDPKTHEAKFDVSAPENPVTFTITRASDYESLPATITKTIKPGETLDEK HHHHHCCEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHEECCCCCCCCCCC VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPL EEEEHEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH MAELAKEGSRPFIPSIEVSPGWGHWGILGADYTKNPISPDLTPAEIIKAGHDMGALVVVN HHHHHHCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEE HPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDSTNMDKRALDSAMGYWNKGIK CCCHHHCEEECCCCCCCCCCCCCCCCEEEEEHHHEECCCCCCCHHHHHHHHHHHHHHHHH KYLSAGSDQHDVTSGLYPGIIRLYANIEGKNTTEKYLKAIKDGHSYVTMGPIFTPKANTM HHHHCCCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCEECCCCCCE FGTTQKVNAGEKHTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKN ECCCCCCCCCCCEECCCEEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCC TWYSFVATDGKGHYAVTNPIWVDIADDTDKLGSTDKPGSTDKPGSTDKPGSTDKPGSADK CEEEEEEECCCCCEEECCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGSTDKPGSAEKPGSTEKPGSNEGKKVTTAGKWKLPNTATHVYGILLAGSVLALLGAGGF CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHCCCCC VFKKRHKHE EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA