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The map label for this gene is 226949361

Identifier: 226949361

GI number: 226949361

Start: 2353392

End: 2354516

Strand: Reverse

Name: 226949361

Synonym: CLM_2284

Alternate gene names: NA

Gene position: 2354516-2353392 (Counterclockwise)

Preceding gene: 226949362

Following gene: 226949360

Centisome position: 56.66

GC content: 31.73

Gene sequence:

>1125_bases
ATGAAAATTTCGAAGAAAGATGCGTTGATATGGTTTGAATTTTTTGCCATGTTGCCAGAAGAAGAAGAAGTTATGCCAAA
ACAACAAGAAATCATTTATGCTACCTTTGCGCAAATTGAGGCAGCAATCGATGATAGAAATAATACGTTGATGTCAGAAA
TTAAAAATTTAAAAACCTTGGAGAATAGAACTCTTTTTGTAGGAAATGAAAGCAAATTCCCAAAAGGATGTCGTTCTTGT
TTGTTGGGAACCGGTTTGAGTGCAATTAGAAAAACGAATAAATGTAATGTAGAGTGTAAGTTCTGTTATAATTATGGAGA
ACTAGATGATATGTTTCCTATTGGCGAAGGTATGTGGGAAATCGGAGGTACAAAATTTTATGAAAAGGATATTGACTTAC
TTCTTTCTATCCATAAGAAACCTACTGGCGTTGCCTACGTTTATTTAGAGCCATTTATGGAAATTGAAAAATATTATTCA
GTTATAAAGAAATTTAGTAATGCTAAGGTTTATCAACATCTATATACAAATGGTACTTTAGCTACAGAAGAGACATTGAA
AGCATTAGGTGAAGCTGGCCTTGACGAGATACGTTTCAACTTGGGTGCATCTAATTGTTCAGACAAAGTTATTGAAAATA
TTAAAATAGCAAAAAAATATATTAAAAATGTAGGCATTGAAACTCCAATGACTCCAGAGTTTTTTGAAGCCTTTTTTAAG
AAAAAGCAAGCAATCTTAGGGACAAACCTTGATTTTATAAATTGTGCAGAACTGCATTTAAATGAAAATAACATAGATAA
TTATTATGGGGACAATATGTATATTTCAAGACATGGCTACATATCTCCAATTTGGAGCATGGAATTAACTTTGAAATTTA
TGAAAATAGCCGATGAAGAAAACTGGGATTTAGTAGTTCATGATTGCTCAAACCATACAAAATTTGCTAGGGATTTGAAT
TTGAGTAGTAAAGAAGGTAAGTGGTTTGGAGCAAGTAATTATGGCTGTGAATTTCCTAGGACTCCATATGAATCATTTTT
ACCAATACTACGTGATGACAATTTTAAATTTTTAAGTGAAGAAGAATTACCTGAAGACTATAAGGCAGGAAAATTGTTTT
TTTAG

Upstream 100 bases:

>100_bases
ATCCCAAAAGGCAATATGTGGAGTAAATTTGTCTTTAGAAGAAGAGTATGTGAAAAAATACAGCAAGAAGATTTAGATTG
TAATTAGAGGAGGATACATT

Downstream 100 bases:

>100_bases
ATAAATAAAGGTTATTAATATTGAAGAGAAAAATAGCGGAAATATTGAATTTTCCGCTATTTTTACATTGATGTACAAGT
TATTATGAAATTTAATTGAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Protein Radical SAM Family; Pyruvate Formate-Lyase Activating-Like; Radical SAM Family Protein

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDDRNNTLMSEIKNLKTLENRTLFVGNESKFPKGCRSC
LLGTGLSAIRKTNKCNVECKFCYNYGELDDMFPIGEGMWEIGGTKFYEKDIDLLLSIHKKPTGVAYVYLEPFMEIEKYYS
VIKKFSNAKVYQHLYTNGTLATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
KKQAILGTNLDFINCAELHLNENNIDNYYGDNMYISRHGYISPIWSMELTLKFMKIADEENWDLVVHDCSNHTKFARDLN
LSSKEGKWFGASNYGCEFPRTPYESFLPILRDDNFKFLSEEELPEDYKAGKLFF

Sequences:

>Translated_374_residues
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDDRNNTLMSEIKNLKTLENRTLFVGNESKFPKGCRSC
LLGTGLSAIRKTNKCNVECKFCYNYGELDDMFPIGEGMWEIGGTKFYEKDIDLLLSIHKKPTGVAYVYLEPFMEIEKYYS
VIKKFSNAKVYQHLYTNGTLATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
KKQAILGTNLDFINCAELHLNENNIDNYYGDNMYISRHGYISPIWSMELTLKFMKIADEENWDLVVHDCSNHTKFARDLN
LSSKEGKWFGASNYGCEFPRTPYESFLPILRDDNFKFLSEEELPEDYKAGKLFF
>Mature_374_residues
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDDRNNTLMSEIKNLKTLENRTLFVGNESKFPKGCRSC
LLGTGLSAIRKTNKCNVECKFCYNYGELDDMFPIGEGMWEIGGTKFYEKDIDLLLSIHKKPTGVAYVYLEPFMEIEKYYS
VIKKFSNAKVYQHLYTNGTLATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
KKQAILGTNLDFINCAELHLNENNIDNYYGDNMYISRHGYISPIWSMELTLKFMKIADEENWDLVVHDCSNHTKFARDLN
LSSKEGKWFGASNYGCEFPRTPYESFLPILRDDNFKFLSEEELPEDYKAGKLFF

Specific function: Unknown

COG id: COG2108

COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43219; Mature: 43219

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDDRNNTLMSEIKNLKTL
CCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ENRTLFVGNESKFPKGCRSCLLGTGLSAIRKTNKCNVECKFCYNYGELDDMFPIGEGMWE
CCCEEEEECCCCCCHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHH
IGGTKFYEKDIDLLLSIHKKPTGVAYVYLEPFMEIEKYYSVIKKFSNAKVYQHLYTNGTL
CCCCEEHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
ATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
CHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KKQAILGTNLDFINCAELHLNENNIDNYYGDNMYISRHGYISPIWSMELTLKFMKIADEE
HHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC
NWDLVVHDCSNHTKFARDLNLSSKEGKWFGASNYGCEFPRTPYESFLPILRDDNFKFLSE
CCEEEEEECCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHCHHHCCCCCCCCCH
EELPEDYKAGKLFF
HCCCCHHCCCCCCC
>Mature Secondary Structure
MKISKKDALIWFEFFAMLPEEEEVMPKQQEIIYATFAQIEAAIDDRNNTLMSEIKNLKTL
CCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ENRTLFVGNESKFPKGCRSCLLGTGLSAIRKTNKCNVECKFCYNYGELDDMFPIGEGMWE
CCCEEEEECCCCCCHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHH
IGGTKFYEKDIDLLLSIHKKPTGVAYVYLEPFMEIEKYYSVIKKFSNAKVYQHLYTNGTL
CCCCEEHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
ATEETLKALGEAGLDEIRFNLGASNCSDKVIENIKIAKKYIKNVGIETPMTPEFFEAFFK
CHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KKQAILGTNLDFINCAELHLNENNIDNYYGDNMYISRHGYISPIWSMELTLKFMKIADEE
HHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC
NWDLVVHDCSNHTKFARDLNLSSKEGKWFGASNYGCEFPRTPYESFLPILRDDNFKFLSE
CCEEEEEECCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHCHHHCCCCCCCCCH
EELPEDYKAGKLFF
HCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA