| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is artP [H]
Identifier: 226949314
GI number: 226949314
Start: 2303454
End: 2304272
Strand: Reverse
Name: artP [H]
Synonym: CLM_2235
Alternate gene names: 226949314
Gene position: 2304272-2303454 (Counterclockwise)
Preceding gene: 226949315
Following gene: 226949313
Centisome position: 55.45
GC content: 29.43
Gene sequence:
>819_bases ATGAGTAAAAAAATATTAGGTAAATTAGGGGCAATTATAATTTCCTTAACTATGGTAATATCATTAGTTGCCTGTAGAAA GAACACTGCAGGTAATGAGGAAAAATCAAAGGTAGATAAAATAAAAGAAAGTGGAAAACTAGTTGTAGGTACTTGTGCAG ATTATCCACCTTATGAATTTCATAAAACTATAAATGGAAAAGATGAAATAGTAGGATTCGATATTACAATAGCAAAGGAA ATAGCAAAGGATCTAGGAGTAAAGTTAGAAATTAAAGATATGAAATTCGATGGGTTATTAGCAGCACTACAATCAGGAAA TGTTGATATAGTTATTGCGGGTATGAATCCAACAGAGGATAGAAAAAAGAGCGTGGATTTTTCAAAGATATACTATCAAG CTATACAAAGCATAGTGGTTAGAGCAGAGGATAAAGATAAATTTAAATCACTAGATGAATTTAAAGGTAAGAAAATTGGA GTACAAAAGGGTACAACTCAAGAAGAAGTTGCAAAGAAAGAAATGACAAACTCAGAAATTAAATCTTTAGGTAAAGTTAC TGACTTAGTATTAGAATTACAGAATAAAAAAGTAGATGGTTTAGTACTTGAAAACCCAGTAGCAGTTTCTTATGCTAAGA ATGGCAAAAATTTAGCAGTTTCAAATATTAAATTTGAAAATAAGGATAAAGGTGCATCTGTAGCTGTTAAAAAAGGCAAT AAAGATTTAGTAGATGCTATAGATAAAACTTTAGATAAACTTATTAAAGAAAAAAGCATAGACAAATTTGTTACAGATGC TAGTAAGGAAGTAGAATAA
Upstream 100 bases:
>100_bases ATATACAAAAATAGTTGAGAAAATTTACAGAAATATAAATCATAACAAAAAATCTATATGCATAATTATACAGAAAATAA TAAATAAGGAGTGAATAGAA
Downstream 100 bases:
>100_bases TACACTCAAAATATAAAGGTGGCTGTCGCACTAACAATAAATTCTACAATATATTGTGTTAACTTTAAATTTGTAAAACA GTATATTGTGTGTAAATTCT
Product: polar amino acid uptake ABC transporter amino acid-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSKKILGKLGAIIISLTMVISLVACRKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEFHKTINGKDEIVGFDITIAKE IAKDLGVKLEIKDMKFDGLLAALQSGNVDIVIAGMNPTEDRKKSVDFSKIYYQAIQSIVVRAEDKDKFKSLDEFKGKKIG VQKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDKGASVAVKKGN KDLVDAIDKTLDKLIKEKSIDKFVTDASKEVE
Sequences:
>Translated_272_residues MSKKILGKLGAIIISLTMVISLVACRKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEFHKTINGKDEIVGFDITIAKE IAKDLGVKLEIKDMKFDGLLAALQSGNVDIVIAGMNPTEDRKKSVDFSKIYYQAIQSIVVRAEDKDKFKSLDEFKGKKIG VQKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDKGASVAVKKGN KDLVDAIDKTLDKLIKEKSIDKFVTDASKEVE >Mature_271_residues SKKILGKLGAIIISLTMVISLVACRKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEFHKTINGKDEIVGFDITIAKEI AKDLGVKLEIKDMKFDGLLAALQSGNVDIVIAGMNPTEDRKKSVDFSKIYYQAIQSIVVRAEDKDKFKSLDEFKGKKIGV QKGTTQEEVAKKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDKGASVAVKKGNK DLVDAIDKTLDKLIKEKSIDKFVTDASKEVE
Specific function: Part of a binding-protein-dependent transport system for arginine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=258, Percent_Identity=31.0077519379845, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1787085, Length=209, Percent_Identity=31.5789473684211, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787088, Length=215, Percent_Identity=30.6976744186047, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787031, Length=212, Percent_Identity=32.5471698113208, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788649, Length=259, Percent_Identity=26.2548262548263, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=24.8927038626609, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29815; Mature: 29684
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKILGKLGAIIISLTMVISLVACRKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHH HKTINGKDEIVGFDITIAKEIAKDLGVKLEIKDMKFDGLLAALQSGNVDIVIAGMNPTED HHCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCCHH RKKSVDFSKIYYQAIQSIVVRAEDKDKFKSLDEFKGKKIGVQKGTTQEEVAKKEMTNSEI HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHH KSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDKGASVAVKKGN HHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCEEEEEEEEECCCCCCCEEEEECCC KDLVDAIDKTLDKLIKEKSIDKFVTDASKEVE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure SKKILGKLGAIIISLTMVISLVACRKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHH HKTINGKDEIVGFDITIAKEIAKDLGVKLEIKDMKFDGLLAALQSGNVDIVIAGMNPTED HHCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCCHH RKKSVDFSKIYYQAIQSIVVRAEDKDKFKSLDEFKGKKIGVQKGTTQEEVAKKEMTNSEI HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHH KSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKNLAVSNIKFENKDKGASVAVKKGN HHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCEEEEEEEEECCCCCCCEEEEECCC KDLVDAIDKTLDKLIKEKSIDKFVTDASKEVE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]