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The map label for this gene is nudF [H]

Identifier: 226949112

GI number: 226949112

Start: 2095284

End: 2095820

Strand: Reverse

Name: nudF [H]

Synonym: CLM_2030

Alternate gene names: 226949112

Gene position: 2095820-2095284 (Counterclockwise)

Preceding gene: 226949113

Following gene: 226949110

Centisome position: 50.44

GC content: 29.05

Gene sequence:

>537_bases
ATGAATTTTTATGAAAAAACATTAGAAGAGCAGGAAATATATAAAGGAAAAATAATAAATGTTGTAAAACAAAAGGTAAA
ATTACCCAATGGCAAAGAATCTTTTAGAGAAATTGTAAAACATCCAGGTGCAGTAGCAATTTTAGCTTATAAAGATAAAG
ACACAGTACTTTTAATAAAGCAATTTAGAAAAGCTATAGATAAAGATATATTTGAGATACCAGCAGGGAAAATAGAAAAG
GGAGAAGAGATAGAAAGTTCAGCTCTAAGGGAATTAGAAGAGGAAACAGGTTATAAGGCGAAAAATATGGAATACTTAGG
CAAGATAGTTACATCCCCAGGTTTCTCAGATGAATACATATATATTTATAAAGCTCTTAATCTTTATAAAGGTAAAGAAG
GCATGGAGGATGAAGATGAGTTTATAGATTTAATGGAAATTAGTATAGACAAATTAAAGGAGTATATTAAAAATGGAGAA
GTAATAGATGGAAAAACTATAAGCGCAGTTATGATGGATACTTTATCTAAGAAGTAG

Upstream 100 bases:

>100_bases
TTAGAAGATATAGTACATAGAAGGTGTTTTTTAATAGAAAATAAATTATAATTAATTTCAATAAGACTAAATTAAAAATT
AATATAAAGAGGTGTTTGAT

Downstream 100 bases:

>100_bases
TAAAATTTTCATATTTTTTTATAGAAGATATTTTTTTAAAATTGGATTTTAATTAATAAGGGACAACCTCATCTGTAGTA
ATTTTAGAAAATTTATTAAA

Product: NUDIX family hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; ASPPase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNFYEKTLEEQEIYKGKIINVVKQKVKLPNGKESFREIVKHPGAVAILAYKDKDTVLLIKQFRKAIDKDIFEIPAGKIEK
GEEIESSALRELEEETGYKAKNMEYLGKIVTSPGFSDEYIYIYKALNLYKGKEGMEDEDEFIDLMEISIDKLKEYIKNGE
VIDGKTISAVMMDTLSKK

Sequences:

>Translated_178_residues
MNFYEKTLEEQEIYKGKIINVVKQKVKLPNGKESFREIVKHPGAVAILAYKDKDTVLLIKQFRKAIDKDIFEIPAGKIEK
GEEIESSALRELEEETGYKAKNMEYLGKIVTSPGFSDEYIYIYKALNLYKGKEGMEDEDEFIDLMEISIDKLKEYIKNGE
VIDGKTISAVMMDTLSKK
>Mature_178_residues
MNFYEKTLEEQEIYKGKIINVVKQKVKLPNGKESFREIVKHPGAVAILAYKDKDTVLLIKQFRKAIDKDIFEIPAGKIEK
GEEIESSALRELEEETGYKAKNMEYLGKIVTSPGFSDEYIYIYKALNLYKGKEGMEDEDEFIDLMEISIDKLKEYIKNGE
VIDGKTISAVMMDTLSKK

Specific function: Acts on ADP-mannose and ADP-glucose as well as ADP- ribose. Prevents glycogen biosynthesis. The reaction catalyzed by this enzyme is a limiting step of the gluconeogenic process [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI37594464, Length=126, Percent_Identity=34.9206349206349, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6319587, Length=161, Percent_Identity=32.2981366459627, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 20463; Mature: 20463

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFYEKTLEEQEIYKGKIINVVKQKVKLPNGKESFREIVKHPGAVAILAYKDKDTVLLIK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHH
QFRKAIDKDIFEIPAGKIEKGEEIESSALRELEEETGYKAKNMEYLGKIVTSPGFSDEYI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEE
YIYKALNLYKGKEGMEDEDEFIDLMEISIDKLKEYIKNGEVIDGKTISAVMMDTLSKK
EEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNFYEKTLEEQEIYKGKIINVVKQKVKLPNGKESFREIVKHPGAVAILAYKDKDTVLLIK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHH
QFRKAIDKDIFEIPAGKIEKGEEIESSALRELEEETGYKAKNMEYLGKIVTSPGFSDEYI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEE
YIYKALNLYKGKEGMEDEDEFIDLMEISIDKLKEYIKNGEVIDGKTISAVMMDTLSKK
EEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 10542272 [H]