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The map label for this gene is ecsC [H]

Identifier: 226949103

GI number: 226949103

Start: 2088400

End: 2089122

Strand: Reverse

Name: ecsC [H]

Synonym: CLM_2021

Alternate gene names: 226949103

Gene position: 2089122-2088400 (Counterclockwise)

Preceding gene: 226949104

Following gene: 226949102

Centisome position: 50.28

GC content: 26.28

Gene sequence:

>723_bases
ATGACTAAATATGAAATAGATGCTATAAATGAGTTAAATATATTTAAAAAAGAAATGACTAAAAGAGATTCTATAGTTTA
TAAAATTACAAAAAAAGTTCAGAATAAAACCAATAGCTTTATTCCTGAAAAAGTACATATGGTAATTACTGAAGGAGTTA
AAAATATGATAAAAGTTGTACTTTTCACCTCTAAATATGTTACTGTGAAACCTCCTAAATTAGCCAACTTAGAAGAAAGG
GAAAATTTGGCTTATGAAAAGTTAAATTTATATAGGAAAACAGCAACAATCAGTGGAGCAGGTACAGGATTAGGTGGTCT
AATGTTAGGTCTTGCAGATTTTCCCATATTATTAACGATTAAAATTAATTTTTTATTTAATTTAGCTAATATATATGGTA
TTGATGCTAGGGAATATAAAGAAAGATTATATATTCTATATATTTTCCAATTAGCTTTTTCAGAGGGATATGAGAGAAGG
AAAACCTATAATAAAATTATAAATTGGAGTAGTTATAGCGAAAAATTGCCGGATAATATTAATGATTTTAATTGGAGAGA
GTTTCAGCAAGAATATAGAGATTACATAGATTTTTCAAAGATGCTCCAAATTATTCCCGGTATAGGTGCCCCAATAGGTG
CTTATGCAAATTATAAATTGATGAATAAATTAGCTTATGTAGCTATTAATTGTTTTAGAATGAGATATTTTTCTTTAAAT
TAA

Upstream 100 bases:

>100_bases
GGTAATATATAAAAAGAAATTTTAGCTTAAAGTGAAATATTAAATCTAGTAATGATTATGTAAAAATAAATTGTGAAAAT
AAAAGTAAGGAGAATTTTCA

Downstream 100 bases:

>100_bases
TCCATATAATAAAATTAGCTTTACTATCCCTCCTAATAAAATTTAATTTTTTCCATAGAAAATTTTTCCGTGATAATATT
ATGAAATTCAGGAGAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTKYEIDAINELNIFKKEMTKRDSIVYKITKKVQNKTNSFIPEKVHMVITEGVKNMIKVVLFTSKYVTVKPPKLANLEER
ENLAYEKLNLYRKTATISGAGTGLGGLMLGLADFPILLTIKINFLFNLANIYGIDAREYKERLYILYIFQLAFSEGYERR
KTYNKIINWSSYSEKLPDNINDFNWREFQQEYRDYIDFSKMLQIIPGIGAPIGAYANYKLMNKLAYVAINCFRMRYFSLN

Sequences:

>Translated_240_residues
MTKYEIDAINELNIFKKEMTKRDSIVYKITKKVQNKTNSFIPEKVHMVITEGVKNMIKVVLFTSKYVTVKPPKLANLEER
ENLAYEKLNLYRKTATISGAGTGLGGLMLGLADFPILLTIKINFLFNLANIYGIDAREYKERLYILYIFQLAFSEGYERR
KTYNKIINWSSYSEKLPDNINDFNWREFQQEYRDYIDFSKMLQIIPGIGAPIGAYANYKLMNKLAYVAINCFRMRYFSLN
>Mature_239_residues
TKYEIDAINELNIFKKEMTKRDSIVYKITKKVQNKTNSFIPEKVHMVITEGVKNMIKVVLFTSKYVTVKPPKLANLEERE
NLAYEKLNLYRKTATISGAGTGLGGLMLGLADFPILLTIKINFLFNLANIYGIDAREYKERLYILYIFQLAFSEGYERRK
TYNKIINWSSYSEKLPDNINDFNWREFQQEYRDYIDFSKMLQIIPGIGAPIGAYANYKLMNKLAYVAINCFRMRYFSLN

Specific function: Unknown, does not resemble components of ABC transporters [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28101; Mature: 27970

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYEIDAINELNIFKKEMTKRDSIVYKITKKVQNKTNSFIPEKVHMVITEGVKNMIKVV
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LFTSKYVTVKPPKLANLEERENLAYEKLNLYRKTATISGAGTGLGGLMLGLADFPILLTI
HHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCEEEEE
KINFLFNLANIYGIDAREYKERLYILYIFQLAFSEGYERRKTYNKIINWSSYSEKLPDNI
EEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCC
NDFNWREFQQEYRDYIDFSKMLQIIPGIGAPIGAYANYKLMNKLAYVAINCFRMRYFSLN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure 
TKYEIDAINELNIFKKEMTKRDSIVYKITKKVQNKTNSFIPEKVHMVITEGVKNMIKVV
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LFTSKYVTVKPPKLANLEERENLAYEKLNLYRKTATISGAGTGLGGLMLGLADFPILLTI
HHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCEEEEE
KINFLFNLANIYGIDAREYKERLYILYIFQLAFSEGYERRKTYNKIINWSSYSEKLPDNI
EEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCC
NDFNWREFQQEYRDYIDFSKMLQIIPGIGAPIGAYANYKLMNKLAYVAINCFRMRYFSLN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]