| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is ybjQ [C]
Identifier: 226949068
GI number: 226949068
Start: 2048287
End: 2048598
Strand: Reverse
Name: ybjQ [C]
Synonym: CLM_1984
Alternate gene names: 226949068
Gene position: 2048598-2048287 (Counterclockwise)
Preceding gene: 226949069
Following gene: 226949067
Centisome position: 49.3
GC content: 32.05
Gene sequence:
>312_bases ATGATATTAGTAAATACTGATTATATTACAGGAAAGGAAGTAGAAACTTTATCCATAGTTAAAGGATCTATTGTATGGTC TAAAAACGTAGGTAAAGATATACTAAGTGGCCTTAAGACTTTAGTAGGAGGAGAAATTGTAAGTTATACAGAAATGATGA ATGAAGCTAGATCTAAAGCTACTAAAAGAATGGTAGAGGAAGCAGAAACTCTAGGTGCAGATGGAGTTTTAAATATAAGA TATGCTACAAGTAGCATAATGCAGGGAGCTGCAGAGGTTATAGTATATGGTACAGCTGTAAAATTTAAATAA
Upstream 100 bases:
>100_bases CTTTTATTAAGTATTATAGTTTTACCTTTCATAGCTTTAGTTGGAGCATTAATATACAATATGTATGAAAGAATTAAAGA AATCAAGGAGGAAGATAAGG
Downstream 100 bases:
>100_bases TATATTCATTATAGTAGATTACATATCTCTTTATATTAATTATTTTATACTTACTATTGGATATAATTCCATAATGATGA ATTGTTTTTATCTTAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MILVNTDYITGKEVETLSIVKGSIVWSKNVGKDILSGLKTLVGGEIVSYTEMMNEARSKATKRMVEEAETLGADGVLNIR YATSSIMQGAAEVIVYGTAVKFK
Sequences:
>Translated_103_residues MILVNTDYITGKEVETLSIVKGSIVWSKNVGKDILSGLKTLVGGEIVSYTEMMNEARSKATKRMVEEAETLGADGVLNIR YATSSIMQGAAEVIVYGTAVKFK >Mature_103_residues MILVNTDYITGKEVETLSIVKGSIVWSKNVGKDILSGLKTLVGGEIVSYTEMMNEARSKATKRMVEEAETLGADGVLNIR YATSSIMQGAAEVIVYGTAVKFK
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002765 [H]
Pfam domain/function: PF01906 DUF74 [H]
EC number: NA
Molecular weight: Translated: 11120; Mature: 11120
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVNTDYITGKEVETLSIVKGSIVWSKNVGKDILSGLKTLVGGEIVSYTEMMNEARSKA CEEECCCCCCCCCCHHEEEECCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TKRMVEEAETLGADGVLNIRYATSSIMQGAAEVIVYGTAVKFK HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHEEEEEEEEECC >Mature Secondary Structure MILVNTDYITGKEVETLSIVKGSIVWSKNVGKDILSGLKTLVGGEIVSYTEMMNEARSKA CEEECCCCCCCCCCHHEEEECCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TKRMVEEAETLGADGVLNIRYATSSIMQGAAEVIVYGTAVKFK HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA