| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is acoL [H]
Identifier: 226948961
GI number: 226948961
Start: 1915808
End: 1917199
Strand: Direct
Name: acoL [H]
Synonym: CLM_1875
Alternate gene names: 226948961
Gene position: 1915808-1917199 (Clockwise)
Preceding gene: 226948960
Following gene: 226948962
Centisome position: 46.11
GC content: 32.04
Gene sequence:
>1392_bases ATGAAGCTAGTAGTTATTGGAGGAGGACCAGGAGGATATGTGGCAGCTATCCGTGGAGCGCAATTAGGAGCAGAGGTTAC TCTTATTGAAAAAGAAAAGTTAGGCGGAACTTGTTTAAATATTGGTTGTATACCTACTAAAGTTTTATTACATTCTTCAG AATTATTAAATGAAATAAAAGAAGCTAGAACTTTAGGAATAGAGGTGAATAATGAAGTAAAAATCAATTGGACTCAGCTT CAAAATAGAAAAAATACTGTAGTAAACACATTAGTTTCAGGGGTATCATCATTACTTGAACATAATAAAGTTAAAGTAAT TAATGGAACTGCAGCCTTTGAAGGAAAAAGTAGTATAAAAGTAACAAAGGATCAGGGAGAAAGTGAAAATATCCAATTTG ATAATGTGATAATTTCATCTGGTTCCGTTCCCTTTATACCTCCTATAAAAGGAAGAGAATTAGAGGGAGTAATTGATAGT ACTGGAGCCTTAAGCTTAGATTCTATTCCTAAAAGTATGGTGATAATTGGTGGAGGCGTTATAGGAATAGAATTTGCAAA TATTTTTAATTCCCTTGGGTGCAAAGTAACAGTTATTGAAATGTTACCATATATATTGCCTCCAGTGGATAGAGAAATTT CTGAGATTCTTAAGGAAAAGCTTAAAAAGGACGGAATTGATATATATAATAACTGTAAGGTAACTAAAATTGAAAATAAC AATGAAAATTTAAATGTAAGTTTTGAAGAAGATAATGACAAATTAAATATAGAGGCACAAAAAGTTTTAATAGCAGTAGG AAGAAGAGCAAATATAAGTAATCTAAATTTAGAAAGTACTGGAGTATATATAGAAAAAGGATGCATTTGGGTAAATGATA ATATGGAAACAAATATAAAAGGAATTTATGCCATAGGTGACTGTACAGGAAAAAATATGCTTGCTCATGTAGCTTCAGAT CAAGGAATAATAGCTGTAGAAAATATTATGGGTAAAAATAAGAAAATGGATTATAAAACTGTACCAGCTTGTGTGTATAC TAAACCAGAGTTAGCTTCTGTAGGATTAACGGAAGAACAAGCAAAACAAAAAGGAGTTGATTACAAAATAGGAAAGTTCC CTCTAATTTATAATGGCAAATCACTTATAATGAATGATACAGAGGGATTTATAAAAATAATAGCGGATAAAAAATATGAA GAGATATTAGGAGTTCATATACTTGGACCTAGGGCAACGGATTTAATAACAGAGGCAGCCTTAGCTCTAAGACTGGAAGC TACCCTAGAGGAAATAATTACAACAGTACATGCTCATCCCACAATAGGAGAAGCGATGAAGGAGGCAGCTCTTGCAGTAA ACAAAGAAGCAATTCATATGGTGAATAAATAA
Upstream 100 bases:
>100_bases CCATAGGGCGGTAGATGGTGCTGTAGCGGCTCAATTCTTAAAAGCAGTTAAAAAATATATGGAAAAGCCAGAGTTGCTTA TATTGTAGGAGGGATAAAAA
Downstream 100 bases:
>100_bases AATCAAGTTATGGAGGTAAAAGTAATGCAGTTTTTAGTAAATAAATCAACAAATCCTTTTTTCAATTTAGCTTTAGAAGA ATATCTTTTAAAAAATGTAG
Product: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase
Products: NA
Alternate protein names: Dihydrolipoamide dehydrogenase [H]
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIKEARTLGIEVNNEVKINWTQL QNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKSSIKVTKDQGESENIQFDNVIISSGSVPFIPPIKGRELEGVIDS TGALSLDSIPKSMVIIGGGVIGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN NENLNVSFEEDNDKLNIEAQKVLIAVGRRANISNLNLESTGVYIEKGCIWVNDNMETNIKGIYAIGDCTGKNMLAHVASD QGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQAKQKGVDYKIGKFPLIYNGKSLIMNDTEGFIKIIADKKYE EILGVHILGPRATDLITEAALALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK
Sequences:
>Translated_463_residues MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIKEARTLGIEVNNEVKINWTQL QNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKSSIKVTKDQGESENIQFDNVIISSGSVPFIPPIKGRELEGVIDS TGALSLDSIPKSMVIIGGGVIGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN NENLNVSFEEDNDKLNIEAQKVLIAVGRRANISNLNLESTGVYIEKGCIWVNDNMETNIKGIYAIGDCTGKNMLAHVASD QGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQAKQKGVDYKIGKFPLIYNGKSLIMNDTEGFIKIIADKKYE EILGVHILGPRATDLITEAALALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK >Mature_463_residues MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIKEARTLGIEVNNEVKINWTQL QNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKSSIKVTKDQGESENIQFDNVIISSGSVPFIPPIKGRELEGVIDS TGALSLDSIPKSMVIIGGGVIGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN NENLNVSFEEDNDKLNIEAQKVLIAVGRRANISNLNLESTGVYIEKGCIWVNDNMETNIKGIYAIGDCTGKNMLAHVASD QGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQAKQKGVDYKIGKFPLIYNGKSLIMNDTEGFIKIIADKKYE EILGVHILGPRATDLITEAALALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK
Specific function: Has chromate reductase activity [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=462, Percent_Identity=42.4242424242424, Blast_Score=342, Evalue=3e-94, Organism=Homo sapiens, GI50301238, Length=451, Percent_Identity=29.0465631929047, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI148277065, Length=464, Percent_Identity=29.5258620689655, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI33519430, Length=464, Percent_Identity=29.5258620689655, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI33519428, Length=464, Percent_Identity=29.5258620689655, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI33519426, Length=464, Percent_Identity=29.5258620689655, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI148277071, Length=464, Percent_Identity=29.5258620689655, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI22035672, Length=455, Percent_Identity=27.6923076923077, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI291045266, Length=430, Percent_Identity=29.3023255813954, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI291045268, Length=424, Percent_Identity=26.6509433962264, Blast_Score=128, Evalue=1e-29, Organism=Escherichia coli, GI1786307, Length=454, Percent_Identity=37.0044052863436, Blast_Score=309, Evalue=3e-85, Organism=Escherichia coli, GI87081717, Length=454, Percent_Identity=32.15859030837, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI87082354, Length=454, Percent_Identity=29.295154185022, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1789915, Length=439, Percent_Identity=30.5239179954442, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1789065, Length=244, Percent_Identity=26.2295081967213, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32565766, Length=458, Percent_Identity=42.1397379912664, Blast_Score=345, Evalue=2e-95, Organism=Caenorhabditis elegans, GI17557007, Length=469, Percent_Identity=30.0639658848614, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI71983429, Length=441, Percent_Identity=28.3446712018141, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI71983419, Length=441, Percent_Identity=28.3446712018141, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI71982272, Length=434, Percent_Identity=28.110599078341, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321091, Length=472, Percent_Identity=42.5847457627119, Blast_Score=349, Evalue=5e-97, Organism=Saccharomyces cerevisiae, GI6325166, Length=447, Percent_Identity=27.2930648769575, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6325240, Length=465, Percent_Identity=27.9569892473118, Blast_Score=168, Evalue=1e-42, Organism=Drosophila melanogaster, GI21358499, Length=459, Percent_Identity=41.3943355119826, Blast_Score=343, Evalue=2e-94, Organism=Drosophila melanogaster, GI24640549, Length=478, Percent_Identity=32.0083682008368, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24640553, Length=478, Percent_Identity=32.0083682008368, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24640551, Length=478, Percent_Identity=32.0083682008368, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI17737741, Length=477, Percent_Identity=28.9308176100629, Blast_Score=162, Evalue=5e-40,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006258 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.4 [H]
Molecular weight: Translated: 50218; Mature: 50218
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIK CEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHH EARTLGIEVNNEVKINWTQLQNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKSSIK HHHEEEEEECCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEE VTKDQGESENIQFDNVIISSGSVPFIPPIKGRELEGVIDSTGALSLDSIPKSMVIIGGGV EECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEECCCCCCEEEEEECCE IGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN EEEEHHHHHHHCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCEEEEEEECC NENLNVSFEEDNDKLNIEAQKVLIAVGRRANISNLNLESTGVYIEKGCIWVNDNMETNIK CCEEEEEEECCCCEEEEEHEEEEEEECCCCCCCCCCCCCCCEEEEECEEEECCCCCCCCE GIYAIGDCTGKNMLAHVASDQGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQ EEEEEECCCCCCCEEEECCCCCEEEEHHHCCCCCCCCCCCCCEEEECCCCHHCCCCCHHH AKQKGVDYKIGKFPLIYNGKSLIMNDTEGFIKIIADKKYEEILGVHILGPRATDLITEAA HHHCCCCEECCCEEEEECCCEEEEECCCCEEEEEECCCHHHHEEEEEECCCHHHHHHHHH LALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure MKLVVIGGGPGGYVAAIRGAQLGAEVTLIEKEKLGGTCLNIGCIPTKVLLHSSELLNEIK CEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHH EARTLGIEVNNEVKINWTQLQNRKNTVVNTLVSGVSSLLEHNKVKVINGTAAFEGKSSIK HHHEEEEEECCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEE VTKDQGESENIQFDNVIISSGSVPFIPPIKGRELEGVIDSTGALSLDSIPKSMVIIGGGV EECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEECCCCCCEEEEEECCE IGIEFANIFNSLGCKVTVIEMLPYILPPVDREISEILKEKLKKDGIDIYNNCKVTKIENN EEEEHHHHHHHCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCEEEEEEECC NENLNVSFEEDNDKLNIEAQKVLIAVGRRANISNLNLESTGVYIEKGCIWVNDNMETNIK CCEEEEEEECCCCEEEEEHEEEEEEECCCCCCCCCCCCCCCEEEEECEEEECCCCCCCCE GIYAIGDCTGKNMLAHVASDQGIIAVENIMGKNKKMDYKTVPACVYTKPELASVGLTEEQ EEEEEECCCCCCCEEEECCCCCEEEEHHHCCCCCCCCCCCCCEEEECCCCHHCCCCCHHH AKQKGVDYKIGKFPLIYNGKSLIMNDTEGFIKIIADKKYEEILGVHILGPRATDLITEAA HHHCCCCEECCCEEEEECCCEEEEECCCCEEEEEECCCHHHHEEEEEECCCHHHHHHHHH LALRLEATLEEIITTVHAHPTIGEAMKEAALAVNKEAIHMVNK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA