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The map label for this gene is 226948939

Identifier: 226948939

GI number: 226948939

Start: 1887967

End: 1888422

Strand: Direct

Name: 226948939

Synonym: CLM_1852

Alternate gene names: NA

Gene position: 1887967-1888422 (Clockwise)

Preceding gene: 226948938

Following gene: 226948942

Centisome position: 45.44

GC content: 30.92

Gene sequence:

>456_bases
ATGAGTAAATCTTCAGAAGAAAAGATGGGAAACAGAGAACTTTTAAATATAAATTCCTTTAGTATATCAGAATTTTGTAA
TGCAGATGAAGGAAATAATTTTATTCATTTTAAACCTTGTGAAATTTGTAAAAGAGTAAAGCTAGATCCTATAGATGTAG
CACATACATCAAGATTATTGCAAGTAAATGTAGCTTTAAGAAATGTTTGTATTGGGAAGGAATTAACTGTAGGATGCATA
ATTGTATCTAGATCTGGTGAAGTGTTAGCTTTTAAATCCGAAACCTTTACTGTAAGAGGAGAAGGTGGATGTGGATGTGG
CTGTTCAGAAAATGGAATGAGATCACCATGTACAAATGTTAATAAAAGATTTAGCTTTATTATTCCAACAAGGGATCTAT
GCGAGTCTCAAGAGGTAAAAGTAAAAATAATTACTAACTATACTCGTCCATGTTAA

Upstream 100 bases:

>100_bases
TAGCTAAAAAAGAAAGGTAACATTTTTTTATGTCTATTAATATAGTGTAGTATAGGACGTTTAATTTACACAACCTAAAT
TAATTAAAGGGGGAAATGTT

Downstream 100 bases:

>100_bases
AGTAAATTAATATTTTAAAATAATTATTTAAAGTAAATCATAACTAAATACATAATAATATACCATTATTATGTATTTAG
TTATAAAAAAGCATATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSKSSEEKMGNRELLNINSFSISEFCNADEGNNFIHFKPCEICKRVKLDPIDVAHTSRLLQVNVALRNVCIGKELTVGCI
IVSRSGEVLAFKSETFTVRGEGGCGCGCSENGMRSPCTNVNKRFSFIIPTRDLCESQEVKVKIITNYTRPC

Sequences:

>Translated_151_residues
MSKSSEEKMGNRELLNINSFSISEFCNADEGNNFIHFKPCEICKRVKLDPIDVAHTSRLLQVNVALRNVCIGKELTVGCI
IVSRSGEVLAFKSETFTVRGEGGCGCGCSENGMRSPCTNVNKRFSFIIPTRDLCESQEVKVKIITNYTRPC
>Mature_150_residues
SKSSEEKMGNRELLNINSFSISEFCNADEGNNFIHFKPCEICKRVKLDPIDVAHTSRLLQVNVALRNVCIGKELTVGCII
VSRSGEVLAFKSETFTVRGEGGCGCGCSENGMRSPCTNVNKRFSFIIPTRDLCESQEVKVKIITNYTRPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16760; Mature: 16629

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSSEEKMGNRELLNINSFSISEFCNADEGNNFIHFKPCEICKRVKLDPIDVAHTSRLL
CCCCCCHHCCCCEEEEECCCCHHHHCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCEEE
QVNVALRNVCIGKELTVGCIIVSRSGEVLAFKSETFTVRGEGGCGCGCSENGMRSPCTNV
EEEEEHHHEECCCCCEEEEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCC
NKRFSFIIPTRDLCESQEVKVKIITNYTRPC
CCEEEEEECCHHHCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
SKSSEEKMGNRELLNINSFSISEFCNADEGNNFIHFKPCEICKRVKLDPIDVAHTSRLL
CCCCCHHCCCCEEEEECCCCHHHHCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCEEE
QVNVALRNVCIGKELTVGCIIVSRSGEVLAFKSETFTVRGEGGCGCGCSENGMRSPCTNV
EEEEEHHHEECCCCCEEEEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCC
NKRFSFIIPTRDLCESQEVKVKIITNYTRPC
CCEEEEEECCHHHCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA