| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is aroA [H]
Identifier: 226948809
GI number: 226948809
Start: 1744684
End: 1746012
Strand: Direct
Name: aroA [H]
Synonym: CLM_1710
Alternate gene names: 226948809
Gene position: 1744684-1746012 (Clockwise)
Preceding gene: 226948808
Following gene: 226948810
Centisome position: 41.99
GC content: 28.07
Gene sequence:
>1329_bases ATGGATTTATTCGTTAAAGGTTTAAAAAAAAGTTTAACAGGAGAATACGAAATAATAGGAGACAAATCTATAGGTCATAG ATCCTTAATAATAGGAGCATTACCTAAAGGAGAATATAAAGTTTATAATTTCCCTAAAAACTTAGATTGTATGGCCACTT TAGACTCTATAAAAAAGCTTGGAGTAGATATAAAGGTAGAAGGAAATGTCTTAGAGGTAAATTCTCCTGGTTATGAAAAT TTTAATAAGAAACCGGAAGTATTACAGGGTAAGAATTCAGGAACCACGATAAGACTTATGGCGGGTATTTTGAGTGGCAT AAGGGCAGAAACAAGATTTATAGGCGATGAATCTTTAAGTTGTAGACCTATGAAAAGAATTATAGAACCCTTAGAAAAAA TGGGAGCAAAAATAGAGAGCAAAGATAATAAGCTACCTCTTAAGTTTTTAAAGCATAGTGGATTAAATTCTATAAAATAT AATATGGAAATAGCATCAGCCCAAGTAAAATCTTGTATATTATTAGCAGGTTTAATGTCAAAAGGAAAAACCACAATAGT AGAGAATAAATCTACTAGAGATCATACAGAGAGAATGTTAAAATATTTAGATGCTTCTATAAATATAAGGAATATATATT CTAAGGATAAAAAGAAAAGTAGTTCTAAAAAGGAAATAACTATAGAAAAGTCTAAATTAAATAGTAAAGATATATATGTA CCGGGAGATATATCTTCGGCAGCCTTTTTAATTTCAGCGGCTTTACTTATACAAGGTTCTAATCTATGTATAAAAAATGT ACTTTTAAATGAGGGCAGGATAGAATATATAAATGTTTTAAGGAATATGGGAGCAAATATAGAAATAGAAAAGGGAAAAT TATTAAATGGTGAACCTGTAGGGAATATATATGTAAAAGAAAGCTATTTAAAGGGTATTACAGTAGAAAAACACATTACG CCTAATATAATAGATGAAATACCAGTATTATCTGTAATAGCAGCCTTTAGTGAAGGAAAAACTATATTTAAATCTGTAGA AGAACTAAAATTTAAAGAAAGTGATAGAGTAGAAGCTATTATAGAAAATTTGAAAAGAGCTGATGTAAAAGCCATATATA AAAATGGAGATTTGATTATAGAAGGAAACAGATCTTACATAGATAAATCCTTAGAGATAGAAAGTTTCAAAGATCACAGA ATAGCTTTAGCTTTTTTAGTTTTATCCCTAAAAAATAAAAAACATACTTTAATTAAAGATTACCAATGCACAGAAATATC ATTCCCTAATTCTTTAAGTTTATTTAATCTAGATTACGAGTTAATTTAG
Upstream 100 bases:
>100_bases ATATTTTTATCGAAATTTGTGTTAATAGGTTAAAAATAGATTAATATAATTATAAAATTATATTAAATCTAAATTAATAT TAAGAAATTGGTGAATAAAA
Downstream 100 bases:
>100_bases ATAGGCTTAAATTTCTTATATATATAAAATTTTTACTATAATAAATAAATTTAATTTAAAAAAGTAATAGTTATTATAAT AAGGAATTTGTTATTATATA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKLGVDIKVEGNVLEVNSPGYEN FNKKPEVLQGKNSGTTIRLMAGILSGIRAETRFIGDESLSCRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKY NMEIASAQVKSCILLAGLMSKGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEKSKLNSKDIYV PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPVGNIYVKESYLKGITVEKHIT PNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAIIENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHR IALAFLVLSLKNKKHTLIKDYQCTEISFPNSLSLFNLDYELI
Sequences:
>Translated_442_residues MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKLGVDIKVEGNVLEVNSPGYEN FNKKPEVLQGKNSGTTIRLMAGILSGIRAETRFIGDESLSCRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKY NMEIASAQVKSCILLAGLMSKGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEKSKLNSKDIYV PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPVGNIYVKESYLKGITVEKHIT PNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAIIENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHR IALAFLVLSLKNKKHTLIKDYQCTEISFPNSLSLFNLDYELI >Mature_442_residues MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKLGVDIKVEGNVLEVNSPGYEN FNKKPEVLQGKNSGTTIRLMAGILSGIRAETRFIGDESLSCRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKY NMEIASAQVKSCILLAGLMSKGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEKSKLNSKDIYV PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPVGNIYVKESYLKGITVEKHIT PNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAIIENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHR IALAFLVLSLKNKKHTLIKDYQCTEISFPNSLSLFNLDYELI
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=437, Percent_Identity=22.6544622425629, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320332, Length=461, Percent_Identity=22.3427331887202, Blast_Score=73, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 49444; Mature: 49444
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKL CCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHC GVDIKVEGNVLEVNSPGYENFNKKPEVLQGKNSGTTIRLMAGILSGIRAETRFIGDESLS CCEEEECCCEEEECCCCCCCCCCCCHHEECCCCCCEEHHHHHHHHHHHHHHEECCCCCCC CRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKYNMEIASAQVKSCILLAGLMS CCHHHHHHHHHHHHCCEECCCCCCCCHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHC KGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEKSKLNSKDIYV CCCEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPV CCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHHHHHHHHCCCCEEEECCEEECCCCC GNIYVKESYLKGITVEKHITPNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAI CEEEEEEHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHH IENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHRIALAFLVLSLKNKKHTLIKD HHHHHHHHHHEEEECCCEEEECCHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEC YQCTEISFPNSLSLFNLDYELI CEEEEECCCCCEEEEECCEEEC >Mature Secondary Structure MDLFVKGLKKSLTGEYEIIGDKSIGHRSLIIGALPKGEYKVYNFPKNLDCMATLDSIKKL CCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHC GVDIKVEGNVLEVNSPGYENFNKKPEVLQGKNSGTTIRLMAGILSGIRAETRFIGDESLS CCEEEECCCEEEECCCCCCCCCCCCHHEECCCCCCEEHHHHHHHHHHHHHHEECCCCCCC CRPMKRIIEPLEKMGAKIESKDNKLPLKFLKHSGLNSIKYNMEIASAQVKSCILLAGLMS CCHHHHHHHHHHHHCCEECCCCCCCCHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHC KGKTTIVENKSTRDHTERMLKYLDASINIRNIYSKDKKKSSSKKEITIEKSKLNSKDIYV CCCEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE PGDISSAAFLISAALLIQGSNLCIKNVLLNEGRIEYINVLRNMGANIEIEKGKLLNGEPV CCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHHHHHHHHCCCCEEEECCEEECCCCC GNIYVKESYLKGITVEKHITPNIIDEIPVLSVIAAFSEGKTIFKSVEELKFKESDRVEAI CEEEEEEHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHH IENLKRADVKAIYKNGDLIIEGNRSYIDKSLEIESFKDHRIALAFLVLSLKNKKHTLIKD HHHHHHHHHHEEEECCCEEEECCHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEC YQCTEISFPNSLSLFNLDYELI CEEEEECCCCCEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]