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The map label for this gene is sbp [H]

Identifier: 226948799

GI number: 226948799

Start: 1737350

End: 1737700

Strand: Direct

Name: sbp [H]

Synonym: CLM_1700

Alternate gene names: 226948799

Gene position: 1737350-1737700 (Clockwise)

Preceding gene: 226948798

Following gene: 226948800

Centisome position: 41.81

GC content: 33.33

Gene sequence:

>351_bases
ATGATAGGTTTTTTAGGACTTATAATAGGCATTATAATAGGAGCAGTTTTTCAAGTTAATATACCAGATAAATTTTCACC
TTATATGTCAGTAGCCATATTGGCTTGCTTAGATTCTGTATTTGGGGCTTTAAGAGCTTCACTTGCAAAAAACTTTCATG
CAGATATATTTATATCAGGATTTTTTGGTAATGCAGTGTTGGCAGCGGGGTTGGCTTACTTAGGAGATAAAATGGGGGTT
CCTATATATTTGGCTGCTGTAGTAGTTTTTGGAGGCAGAATATTTGATAATTTTGGAGTTATAAGAAGAATACTTATAGA
AAAAGCTAAATCTCATACTGAGGTGAAATAG

Upstream 100 bases:

>100_bases
ATAAAAATGTCGAAATATAACAAGGTTTATAAAAATGAATATGCAAAACCTGTGGAAGAAAAATAATTTCTACTAAAAGT
AATATAGGAGGACTTTTATT

Downstream 100 bases:

>100_bases
ATGAGAAATAACGAAGCTACCATATTTATATTCATAGCTTCTATAGCCATAGGAATATTAATCTCCATGAATATAAGTTT
TAAAAAGGTAAATGCTAGAA

Product: small basic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MIGFLGLIIGIIIGAVFQVNIPDKFSPYMSVAILACLDSVFGALRASLAKNFHADIFISGFFGNAVLAAGLAYLGDKMGV
PIYLAAVVVFGGRIFDNFGVIRRILIEKAKSHTEVK

Sequences:

>Translated_116_residues
MIGFLGLIIGIIIGAVFQVNIPDKFSPYMSVAILACLDSVFGALRASLAKNFHADIFISGFFGNAVLAAGLAYLGDKMGV
PIYLAAVVVFGGRIFDNFGVIRRILIEKAKSHTEVK
>Mature_116_residues
MIGFLGLIIGIIIGAVFQVNIPDKFSPYMSVAILACLDSVFGALRASLAKNFHADIFISGFFGNAVLAAGLAYLGDKMGV
PIYLAAVVVFGGRIFDNFGVIRRILIEKAKSHTEVK

Specific function: Unknown

COG id: COG3856

COG function: function code S; Uncharacterized conserved protein (small basic protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sbp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009709 [H]

Pfam domain/function: PF06947 DUF1290 [H]

EC number: NA

Molecular weight: Translated: 12394; Mature: 12394

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFLGLIIGIIIGAVFQVNIPDKFSPYMSVAILACLDSVFGALRASLAKNFHADIFISG
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEC
FFGNAVLAAGLAYLGDKMGVPIYLAAVVVFGGRIFDNFGVIRRILIEKAKSHTEVK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIGFLGLIIGIIIGAVFQVNIPDKFSPYMSVAILACLDSVFGALRASLAKNFHADIFISG
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEC
FFGNAVLAAGLAYLGDKMGVPIYLAAVVVFGGRIFDNFGVIRRILIEKAKSHTEVK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3139638; 9384377; 1569582 [H]