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The map label for this gene is 226948345

Identifier: 226948345

GI number: 226948345

Start: 1277946

End: 1278839

Strand: Direct

Name: 226948345

Synonym: CLM_1227

Alternate gene names: NA

Gene position: 1277946-1278839 (Clockwise)

Preceding gene: 226948344

Following gene: 226948346

Centisome position: 30.75

GC content: 28.08

Gene sequence:

>894_bases
TTGGAGTACAGATTAGTGAAAAGATTTAAAAAGTTTTATATTGAGATTACGAATGTATGTAATCTTGCCTGTGATTTTTG
TCCTGAGACAAGAAGGAAACCGCAATTTATGCCAATAGAAATTTTTGATAAAATATTAGACCAAATAAAGCCTTATACAG
ATTATATATATTTTCATGTAAAGGGAGAGCCTCTTCTTCACCCAGATATAGATAAATTTTTAGATTTAAGCTACAAAAAA
GATTTTAAGGTTAATATAACTACAAACGGAACTTTAATAAATAAGGCTAAGGATAAAATTATAATGAAGAAAGCCTTACG
ACAGGTTAACTTTTCCCTACATAGCTTTGATGGAAATGAAAATTCTAAAAACAAGGACAAATATATTAATGATATTCTTT
CCTTTGTAAGAGATACAATTGAAAATAATAATATTTTTATATCTTTAAGGTTATGGAATCTAGATGAGGATAATAAAACA
AATCTTAAAAAGAAGAGAAATGCTGAATTGCTTCATATAATAGAAAAGGAATTTAAATTACCTTATAAAATTGAAGAAAA
AATAACTCCAGGTAAGGGTATTAAAATCTATAATAGAATATATATAAATCAGGACCATGAATTCGAGTGGCCAGATCTAA
AGGCAGAAGAGGATGATGGAAAAGGTTTTTGTTATGGGCTTAGAAATCAAGTGGCCATATTAGTAGATGGAACAGTAGTA
CCTTGTTGTTTGGATGGGGAAGGTATAATTAGTCTTGGAAATATAAATGAGATTGATTTTTCTAAGATAATAGATAGTGA
AAGAGCTAACAATATTTTAGATGGCTTTTCAAGGAGAGAAGCAGTAGAAGAGTTATGTAAAAAATGTGGATATAGAAAGA
AATTTAGTATTTAA

Upstream 100 bases:

>100_bases
GTAAAGATATCAGGTGATTTTTAGATTTAGGTGGAGTTTACTTAGAATGATTACTTTTTGTGATATAAGCATTATTAACA
ATGAGATGTAGTATATAAGA

Downstream 100 bases:

>100_bases
GTAATAATATATATAGTGATTATTGTTAAAAAATTAATTATATAAAAAAAACTTGAAAAAATGAAAACGATATGATATTA
TATGAATATAATTTAGTTAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical Sam Domain Protein; Radical SAM Family Protein; Fe-S Oxidoreductase Containing Radical SAM Domain; Pyruvate Formate-Lyase Activating; Molybdenum Cofactor Biosynthesis Protein; Fe-S Oxidoreductase; Radical SAM

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MEYRLVKRFKKFYIEITNVCNLACDFCPETRRKPQFMPIEIFDKILDQIKPYTDYIYFHVKGEPLLHPDIDKFLDLSYKK
DFKVNITTNGTLINKAKDKIIMKKALRQVNFSLHSFDGNENSKNKDKYINDILSFVRDTIENNNIFISLRLWNLDEDNKT
NLKKKRNAELLHIIEKEFKLPYKIEEKITPGKGIKIYNRIYINQDHEFEWPDLKAEEDDGKGFCYGLRNQVAILVDGTVV
PCCLDGEGIISLGNINEIDFSKIIDSERANNILDGFSRREAVEELCKKCGYRKKFSI

Sequences:

>Translated_297_residues
MEYRLVKRFKKFYIEITNVCNLACDFCPETRRKPQFMPIEIFDKILDQIKPYTDYIYFHVKGEPLLHPDIDKFLDLSYKK
DFKVNITTNGTLINKAKDKIIMKKALRQVNFSLHSFDGNENSKNKDKYINDILSFVRDTIENNNIFISLRLWNLDEDNKT
NLKKKRNAELLHIIEKEFKLPYKIEEKITPGKGIKIYNRIYINQDHEFEWPDLKAEEDDGKGFCYGLRNQVAILVDGTVV
PCCLDGEGIISLGNINEIDFSKIIDSERANNILDGFSRREAVEELCKKCGYRKKFSI
>Mature_297_residues
MEYRLVKRFKKFYIEITNVCNLACDFCPETRRKPQFMPIEIFDKILDQIKPYTDYIYFHVKGEPLLHPDIDKFLDLSYKK
DFKVNITTNGTLINKAKDKIIMKKALRQVNFSLHSFDGNENSKNKDKYINDILSFVRDTIENNNIFISLRLWNLDEDNKT
NLKKKRNAELLHIIEKEFKLPYKIEEKITPGKGIKIYNRIYINQDHEFEWPDLKAEEDDGKGFCYGLRNQVAILVDGTVV
PCCLDGEGIISLGNINEIDFSKIIDSERANNILDGFSRREAVEELCKKCGYRKKFSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34889; Mature: 34889

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYRLVKRFKKFYIEITNVCNLACDFCPETRRKPQFMPIEIFDKILDQIKPYTDYIYFHV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
KGEPLLHPDIDKFLDLSYKKDFKVNITTNGTLINKAKDKIIMKKALRQVNFSLHSFDGNE
CCCCCCCCCHHHHHCCCCCCCEEEEEEECCEEEHHHHHHHHHHHHHHHHCCEEEECCCCC
NSKNKDKYINDILSFVRDTIENNNIFISLRLWNLDEDNKTNLKKKRNAELLHIIEKEFKL
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHCC
PYKIEEKITPGKGIKIYNRIYINQDHEFEWPDLKAEEDDGKGFCYGLRNQVAILVDGTVV
CEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCEEE
PCCLDGEGIISLGNINEIDFSKIIDSERANNILDGFSRREAVEELCKKCGYRKKFSI
EEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEYRLVKRFKKFYIEITNVCNLACDFCPETRRKPQFMPIEIFDKILDQIKPYTDYIYFHV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
KGEPLLHPDIDKFLDLSYKKDFKVNITTNGTLINKAKDKIIMKKALRQVNFSLHSFDGNE
CCCCCCCCCHHHHHCCCCCCCEEEEEEECCEEEHHHHHHHHHHHHHHHHCCEEEECCCCC
NSKNKDKYINDILSFVRDTIENNNIFISLRLWNLDEDNKTNLKKKRNAELLHIIEKEFKL
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHCC
PYKIEEKITPGKGIKIYNRIYINQDHEFEWPDLKAEEDDGKGFCYGLRNQVAILVDGTVV
CEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCEEE
PCCLDGEGIISLGNINEIDFSKIIDSERANNILDGFSRREAVEELCKKCGYRKKFSI
EEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA