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The map label for this gene is X [H]

Identifier: 226948336

GI number: 226948336

Start: 1267156

End: 1267521

Strand: Direct

Name: X [H]

Synonym: CLM_1218

Alternate gene names: 226948336

Gene position: 1267156-1267521 (Clockwise)

Preceding gene: 226948335

Following gene: 226948337

Centisome position: 30.5

GC content: 26.78

Gene sequence:

>366_bases
ATGGTATATTATATTCAAGGCGGTGAAATAAATTTGGATATAAATAAAGAAATGATAAAGGGATATATAGAAAGTATAAT
ATTATGTTTGTTAAAAGATGAAGATTTATATGGATATGAAATTTCAAAAATAGTTAGAAATATGAGTCAGGAAACCTTTG
AAATTAAGGAAGGTACCCTATATGTAGTGTTGAAAAGGCTTGAAAATGACAATTTAGTTTTATCATATTGGGGTAATGAT
AAAAGTGGAGGTGGGAGACGCAGGTATTATAAAATTACTGATGATGGATTGAATTATATTATAAGAAAAAAGGAGGAATG
GATATTTTTTAAAAACATTATTGATACATTCTTTAAGGGGGTATAG

Upstream 100 bases:

>100_bases
AAGCTAGTAATCATTGGATAAAAATATTATAGGGCTATTATAATTTAAGTTTATATCTATATTTATATTGAATAAAGTAC
TTTATGCTATAGAGTAGTTG

Downstream 100 bases:

>100_bases
ATGTGAAGAGAGTGGACAAGTATATTGATTTAGTTTATAAAAACGTAGAAGGGAATAAAGAAGAAATTAATATAATGAAA
CAGGAGATGAAAAGTCATCT

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MVYYIQGGEINLDINKEMIKGYIESIILCLLKDEDLYGYEISKIVRNMSQETFEIKEGTLYVVLKRLENDNLVLSYWGND
KSGGGRRRYYKITDDGLNYIIRKKEEWIFFKNIIDTFFKGV

Sequences:

>Translated_121_residues
MVYYIQGGEINLDINKEMIKGYIESIILCLLKDEDLYGYEISKIVRNMSQETFEIKEGTLYVVLKRLENDNLVLSYWGND
KSGGGRRRYYKITDDGLNYIIRKKEEWIFFKNIIDTFFKGV
>Mature_121_residues
MVYYIQGGEINLDINKEMIKGYIESIILCLLKDEDLYGYEISKIVRNMSQETFEIKEGTLYVVLKRLENDNLVLSYWGND
KSGGGRRRYYKITDDGLNYIIRKKEEWIFFKNIIDTFFKGV

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 14358; Mature: 14358

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYYIQGGEINLDINKEMIKGYIESIILCLLKDEDLYGYEISKIVRNMSQETFEIKEGTL
CEEEEECCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHEEEECCCEE
YVVLKRLENDNLVLSYWGNDKSGGGRRRYYKITDDGLNYIIRKKEEWIFFKNIIDTFFKG
EEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCEEHHHHHHHHHHCC
V
C
>Mature Secondary Structure
MVYYIQGGEINLDINKEMIKGYIESIILCLLKDEDLYGYEISKIVRNMSQETFEIKEGTL
CEEEEECCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHEEEECCCEE
YVVLKRLENDNLVLSYWGNDKSGGGRRRYYKITDDGLNYIIRKKEEWIFFKNIIDTFFKG
EEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCEEHHHHHHHHHHCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA