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The map label for this gene is chiA [H]

Identifier: 226948332

GI number: 226948332

Start: 1260403

End: 1261902

Strand: Direct

Name: chiA [H]

Synonym: CLM_1214

Alternate gene names: 226948332

Gene position: 1260403-1261902 (Clockwise)

Preceding gene: 226948331

Following gene: 226948333

Centisome position: 30.33

GC content: 32.07

Gene sequence:

>1500_bases
ATGAAAAAAGTGTTTAAAAGAATATTTCCAATCTCTTTAGTATTAGTTATGGTATTTTTGTTTATGCCTATAACTAATGT
ATTTGCTAGCTCAAATTCTTCTGACAAAATATTGGTAGGATATTGGCATAATTTTGACAATGGCACTGGAATTATTAGAC
TAAAAGATGTATCTACTAAGTGGGATGTTATAAATGTAGCATTTGGAGAATCTATAGGAGATAGGGATACTATAAAATTT
TCACCGGAAATAGGAACCGATCAAGAGTTTAAAGAAGACATTGCATATCTTAATAGCATAGGAAAAAAAGTTGTTCTTTC
TATTGGAGGACAAAATGGGGTAGTATTATTACCCGATGAAAATGCAAAAAAGAATTTTATAGATTCTATGATATCTTTGA
TTAATAAGTATGGATTTAATGGCATAGATATTGATTTGGAATCTGGGATAAATTTAATAAATAATGATAAAGATTTTAAG
AATCCTAAGACTCCACAGATTGTAAACCTTATTTCTGCTGTTAGAGCTATATGTGATTATTATGGTCCAGATTTTGTATT
AAGTATGGCTCCTGAAACAGCATATGTACAAGGTGGATATGTGGCTTATGCAGGAATTTGGGGAGCTTATTTACCAATAA
TACATGGATTAAGGGATAAACTTACTTATATCCATGTACAGCATTATAATGCGGGAGGAAATACAGCACTTGATGGAAAT
AATTATACACAGGGAACAGCAGATTATGAGGTGGCAATGGCAGAAATGTTATTACAAGGTTTTCCTGTAGCAGGGAATGC
AGATAATATATTTACACCATTAAAGCAAGAACAGGTGGTAATAGGTTTACCAGCTTGTTCGTCAGCTGCTCCTAGTGGAG
GATATATTAAACCTAGCGAAATGAAAAAGGCATTGAACTATCTTATGAGAGGAATTCCTTATGGAGGAAAGTATAAGCTT
GTAAATAGTAATGGATATCCAGCTTTTAAAGGATTAATGACATGGTCAATTAACTGGGATGCAAAAAGTAATTATGAATT
TTCAACAAGTTATAGAGAATATTTTGATAATTTTAAGCAACCACCAGTAACTGAGAAACCATCTATACCAATAGGTTTAA
AGGGAGAAGCTATAAGTAAGACACAAATAAATATAGCATGGAATTTAGCACTTGGAGCAACTAGCTATGATTTAAAGGTT
GATGGAAACATAATAAATAATGTGAATAATCCATACAAACATATTAATCTCAAACCAGGCTCTATGCATAGCTATGAGGT
AAGGGCTGTGAATTCAGTAGGGAATAGCGAATGGAGTAAAGCTATAATAGTACAGACTAAATCTGAATCTGATGTAGAAA
AATGGGGAACAAATATTTTATATAAAGCTGGAGACATTGTAAATTATGAAGGAATTAATTACAGATGTATACAGACACAT
ATTTCTCTAATAGGATGGGAACCTATAAATACTCCTACCCTTTGGGAAAAAACAAACTAG

Upstream 100 bases:

>100_bases
TGTTTAAAAATTTAGTCATTATAATATATTTGGAATAATTTAATGGATAGAGTCCTATGTATTAGTATGAAAGTACTAAT
AATGAAAGGATATTAGAAAA

Downstream 100 bases:

>100_bases
ATATATTGAATTTTAATTATATCTATGATTGAGATAGTCATAAATAAAATTTAACTATAAACAGAGAAGGGCCTTCTCAT
AATGAATTTTATGCATTATG

Product: chitinase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MKKVFKRIFPISLVLVMVFLFMPITNVFASSNSSDKILVGYWHNFDNGTGIIRLKDVSTKWDVINVAFGESIGDRDTIKF
SPEIGTDQEFKEDIAYLNSIGKKVVLSIGGQNGVVLLPDENAKKNFIDSMISLINKYGFNGIDIDLESGINLINNDKDFK
NPKTPQIVNLISAVRAICDYYGPDFVLSMAPETAYVQGGYVAYAGIWGAYLPIIHGLRDKLTYIHVQHYNAGGNTALDGN
NYTQGTADYEVAMAEMLLQGFPVAGNADNIFTPLKQEQVVIGLPACSSAAPSGGYIKPSEMKKALNYLMRGIPYGGKYKL
VNSNGYPAFKGLMTWSINWDAKSNYEFSTSYREYFDNFKQPPVTEKPSIPIGLKGEAISKTQINIAWNLALGATSYDLKV
DGNIINNVNNPYKHINLKPGSMHSYEVRAVNSVGNSEWSKAIIVQTKSESDVEKWGTNILYKAGDIVNYEGINYRCIQTH
ISLIGWEPINTPTLWEKTN

Sequences:

>Translated_499_residues
MKKVFKRIFPISLVLVMVFLFMPITNVFASSNSSDKILVGYWHNFDNGTGIIRLKDVSTKWDVINVAFGESIGDRDTIKF
SPEIGTDQEFKEDIAYLNSIGKKVVLSIGGQNGVVLLPDENAKKNFIDSMISLINKYGFNGIDIDLESGINLINNDKDFK
NPKTPQIVNLISAVRAICDYYGPDFVLSMAPETAYVQGGYVAYAGIWGAYLPIIHGLRDKLTYIHVQHYNAGGNTALDGN
NYTQGTADYEVAMAEMLLQGFPVAGNADNIFTPLKQEQVVIGLPACSSAAPSGGYIKPSEMKKALNYLMRGIPYGGKYKL
VNSNGYPAFKGLMTWSINWDAKSNYEFSTSYREYFDNFKQPPVTEKPSIPIGLKGEAISKTQINIAWNLALGATSYDLKV
DGNIINNVNNPYKHINLKPGSMHSYEVRAVNSVGNSEWSKAIIVQTKSESDVEKWGTNILYKAGDIVNYEGINYRCIQTH
ISLIGWEPINTPTLWEKTN
>Mature_499_residues
MKKVFKRIFPISLVLVMVFLFMPITNVFASSNSSDKILVGYWHNFDNGTGIIRLKDVSTKWDVINVAFGESIGDRDTIKF
SPEIGTDQEFKEDIAYLNSIGKKVVLSIGGQNGVVLLPDENAKKNFIDSMISLINKYGFNGIDIDLESGINLINNDKDFK
NPKTPQIVNLISAVRAICDYYGPDFVLSMAPETAYVQGGYVAYAGIWGAYLPIIHGLRDKLTYIHVQHYNAGGNTALDGN
NYTQGTADYEVAMAEMLLQGFPVAGNADNIFTPLKQEQVVIGLPACSSAAPSGGYIKPSEMKKALNYLMRGIPYGGKYKL
VNSNGYPAFKGLMTWSINWDAKSNYEFSTSYREYFDNFKQPPVTEKPSIPIGLKGEAISKTQINIAWNLALGATSYDLKV
DGNIINNVNNPYKHINLKPGSMHSYEVRAVNSVGNSEWSKAIIVQTKSESDVEKWGTNILYKAGDIVNYEGINYRCIQTH
ISLIGWEPINTPTLWEKTN

Specific function: Unknown

COG id: COG3469

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR015520 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 55373; Mature: 55373

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50853 FN3 ; PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVFKRIFPISLVLVMVFLFMPITNVFASSNSSDKILVGYWHNFDNGTGIIRLKDVSTK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEECCCC
WDVINVAFGESIGDRDTIKFSPEIGTDQEFKEDIAYLNSIGKKVVLSIGGQNGVVLLPDE
CCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCC
NAKKNFIDSMISLINKYGFNGIDIDLESGINLINNDKDFKNPKTPQIVNLISAVRAICDY
CCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
YGPDFVLSMAPETAYVQGGYVAYAGIWGAYLPIIHGLRDKLTYIHVQHYNAGGNTALDGN
CCCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEECCC
NYTQGTADYEVAMAEMLLQGFPVAGNADNIFTPLKQEQVVIGLPACSSAAPSGGYIKPSE
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHH
MKKALNYLMRGIPYGGKYKLVNSNGYPAFKGLMTWSINWDAKSNYEFSTSYREYFDNFKQ
HHHHHHHHHHCCCCCCEEEEEECCCCCCEECEEEEEEECCCCCCCEECHHHHHHHHCCCC
PPVTEKPSIPIGLKGEAISKTQINIAWNLALGATSYDLKVDGNIINNVNNPYKHINLKPG
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEECCC
SMHSYEVRAVNSVGNSEWSKAIIVQTKSESDVEKWGTNILYKAGDIVNYEGINYRCIQTH
CCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHCCEEEEECCCEEEECCCCEEEEEEE
ISLIGWEPINTPTLWEKTN
EEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKKVFKRIFPISLVLVMVFLFMPITNVFASSNSSDKILVGYWHNFDNGTGIIRLKDVSTK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEECCCC
WDVINVAFGESIGDRDTIKFSPEIGTDQEFKEDIAYLNSIGKKVVLSIGGQNGVVLLPDE
CCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCC
NAKKNFIDSMISLINKYGFNGIDIDLESGINLINNDKDFKNPKTPQIVNLISAVRAICDY
CCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
YGPDFVLSMAPETAYVQGGYVAYAGIWGAYLPIIHGLRDKLTYIHVQHYNAGGNTALDGN
CCCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEECCC
NYTQGTADYEVAMAEMLLQGFPVAGNADNIFTPLKQEQVVIGLPACSSAAPSGGYIKPSE
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHH
MKKALNYLMRGIPYGGKYKLVNSNGYPAFKGLMTWSINWDAKSNYEFSTSYREYFDNFKQ
HHHHHHHHHHCCCCCCEEEEEECCCCCCEECEEEEEEECCCCCCCEECHHHHHHHHCCCC
PPVTEKPSIPIGLKGEAISKTQINIAWNLALGATSYDLKVDGNIINNVNNPYKHINLKPG
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEECCC
SMHSYEVRAVNSVGNSEWSKAIIVQTKSESDVEKWGTNILYKAGDIVNYEGINYRCIQTH
CCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHCCEEEEECCCEEEECCCCEEEEEEE
ISLIGWEPINTPTLWEKTN
EEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1729234 [H]