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The map label for this gene is cypC [H]

Identifier: 226948314

GI number: 226948314

Start: 1235184

End: 1236443

Strand: Direct

Name: cypC [H]

Synonym: CLM_1194

Alternate gene names: 226948314

Gene position: 1235184-1236443 (Clockwise)

Preceding gene: 226948313

Following gene: 226948316

Centisome position: 29.73

GC content: 36.03

Gene sequence:

>1260_bases
ATGTTAATAGAGGAACATATTCCAAAGGATAAAGGTATTGACAACACTTTCGCTTTGTTACAGGAGGGATATTTATTTAT
CAGAAACAGGGTTGACAGGTATCAGTCTAACTTGTTTGAAACTCACTTATTTGGACAAAAGGTAATATGCATGACTGGTG
AGGAAGCTGCAAAGTTGTTTTACAATGAGGAACTGTTTCAACGAAATGGTGCAGCACCTAAGCGGATACAAAAAACCTTG
TTTGGTGAAAATGCAATTCAGACTATGGATGATGAAGAGCATATTCATAGAAAGCATCTTTTTATGTCATTGATGACTCC
ACTATCTCAAAAGATATTAGCTGAACTTGTAATGGAGAAATGGAAATCTTCTATTGATAAATGGGAGCATGACAAGGAGA
TTGTACTTTTTAATGAGGCAAAAGAAACTTTATGCCAGATATCATGTAAGTGGGCAGGAGTTCCATTACATAAATCAGAA
ATAAAAAATCGGGCAGAGGATTTTAATTTAATGGTTAATGCTTTAGGGGCAGTTGGACCACAGTATTGGAAAGGGAAAAT
GGCTAGATCCAGAGCGGAAAAGTGGATAAGTGGGATAATCCAAGATGTTCGTTCTAGTAGGCTGGACGCAGAAGAAAGTA
CACCACTATATGCTATGGCTTTTCATAGGGATCTTGATGGCAATCAAATGGATACTTCAATGGCAGCCATAGAACTTATT
AATGTACTGCGTCCTATTGTTGCTATTTCAACCTTCATTACCTTTGCAGCCTTAGGTCTATATGAACATCCAGAATGTAA
AGAAAAATTAATTTCAGGTGGCGACAGCTATGTTGAAATGTTTGCACAGGAAGTTCGACGATACTATCCTTTCGCTCCTT
TTCTTGGTGCAAGAGTGCGAAAGGATTTTATATTGAATGAATGTGAATTAAAGAAAGGAATGCTAGTGTTACTTGATATG
TATGGTACAAATCATGATTCACAGATATGGGAAAAACCTAACGAATTCTATCCAGAGAGGTTTAAAGAATGGAAAGGAAG
CTTATTTGATTTTATCCCTCAAGGCGGAGGTGACCCTGTTAAGACACACCGTTGTCCAGGAGAGGGTATTACTATGGAAA
TTATGAAAGGAAGTTTAGATTTTCTTGTTAACAAGATTGAGTTTCAGGTTCCAAAGCAGGATTTAAGTTATAGTCTAATA
AAAATACCTACATTACCTAAAAGTGGATTTATTATGACTAATATTAAAAGAAAGTTTTAA

Upstream 100 bases:

>100_bases
TTGTTGAGGTACCTATTCTTATGTATAAAAAAGATACATTTTATTAATGAATATAGTATACGTTAATTTTACAATAAGAA
AAGAAGGAGAAGATAAGTGT

Downstream 100 bases:

>100_bases
AGTGATAATAATTTAGGAGAAATTAATTTGGTATAAAAATAAATTGAAATAGTTATAGTAAGGTAGATAAGAAAAAAAGA
GAAGGATGATATTAAATTTA

Product: cytochrome P450

Products: NA

Alternate protein names: Cytochrome P450BsBeta; Fatty acid beta-hydroxylase [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MLIEEHIPKDKGIDNTFALLQEGYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLFYNEELFQRNGAAPKRIQKTL
FGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEKWKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSE
IKNRAEDFNLMVNALGAVGPQYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVRKDFILNECELKKGMLVLLDM
YGTNHDSQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPVKTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLI
KIPTLPKSGFIMTNIKRKF

Sequences:

>Translated_419_residues
MLIEEHIPKDKGIDNTFALLQEGYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLFYNEELFQRNGAAPKRIQKTL
FGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEKWKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSE
IKNRAEDFNLMVNALGAVGPQYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVRKDFILNECELKKGMLVLLDM
YGTNHDSQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPVKTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLI
KIPTLPKSGFIMTNIKRKF
>Mature_419_residues
MLIEEHIPKDKGIDNTFALLQEGYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLFYNEELFQRNGAAPKRIQKTL
FGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEKWKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSE
IKNRAEDFNLMVNALGAVGPQYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVRKDFILNECELKKGMLVLLDM
YGTNHDSQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPVKTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLI
KIPTLPKSGFIMTNIKRKF

Specific function: Catalyzes the alpha- and beta-hydroxylation of myristic acid in the presence of hydrogen peroxide [H]

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

Organism=Homo sapiens, GI4503231, Length=182, Percent_Identity=26.3736263736264, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002401 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 48373; Mature: 48373

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEEHIPKDKGIDNTFALLQEGYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
YNEELFQRNGAAPKRIQKTLFGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEK
HHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSEIKNRAEDFNLMVNALGAVGP
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
QYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
KDFILNECELKKGMLVLLDMYGTNHDSQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPV
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHCHHHHHCCCCCCCCC
KTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLIKIPTLPKSGFIMTNIKRKF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MLIEEHIPKDKGIDNTFALLQEGYLFIRNRVDRYQSNLFETHLFGQKVICMTGEEAAKLF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
YNEELFQRNGAAPKRIQKTLFGENAIQTMDDEEHIHRKHLFMSLMTPLSQKILAELVMEK
HHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSEIKNRAEDFNLMVNALGAVGP
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
QYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFHRDLDGNQMDTSMAAIELI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
NVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMFAQEVRRYYPFAPFLGARVR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
KDFILNECELKKGMLVLLDMYGTNHDSQIWEKPNEFYPERFKEWKGSLFDFIPQGGGDPV
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHCHHHHHCCCCCCCCC
KTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSLIKIPTLPKSGFIMTNIKRKF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10529095; 9384377; 12519760 [H]