Click here to switch to the map view.

The map label for this gene is 226948286

Identifier: 226948286

GI number: 226948286

Start: 1209641

End: 1210549

Strand: Direct

Name: 226948286

Synonym: CLM_1166

Alternate gene names: NA

Gene position: 1209641-1210549 (Clockwise)

Preceding gene: 226948285

Following gene: 226948287

Centisome position: 29.11

GC content: 27.06

Gene sequence:

>909_bases
ATGTTAATGAGAAAATTAGTAAATTTATTACTGATTGGGATAATTGGAATGTTATTAGGCGCCTGTTCTACAAATAGAAC
TTTAAATGATTTTAAAAATGGGAAAGATAAAGACACACTTCAAATTCCTATTGTCCATGATGTTTATAATTATAATGGAA
AACCAAATGCTGATGTTTTGTCTATTTTTAACTCTAACGGTGATGTTAGAATTAGCAAATCAGAGACCAATGATTTAAAG
GTTAAGACAAAATTGGTACAAACTAAATCAATAAAAGATATAGATAAAAAGCTAAATAATCTTGCCATTAAACCTAAAAT
TGAAAAAGGTGTAATTTTTTATGAACCTTTATATACAAATAATAAAAATCAAAATTATTGGGAGTGGATTAAATCGAGCT
TAAATGCAAATGGAATACAAGTAAATTTTGATGTTCAAATCCCACAAACAATTAAAGAAGTACGCATTTATAGTGAATTA
GGAAATATAAATTTACAAAATATTTCAGCAAAAATTCATGCTCAAACTAATATTGGTACTATCACTAGTGCAAATATAAA
TCCCTTGGACAGTGCAGTGTTTAAGGCTAATATACCTTCAAGAGGGGAAAATGCATTAGATATTTCATTATCTAGTATTG
ATAACGTAAACTCTATAACAGCAGGAGTAACATCAGGTAATATAGTTTTCAATTTACCATCAGGCTCAGAGTACATTTAT
AACCAAATGGATCCAAAACAAATGCCTGTTACTTATCCTTATGATATGTATTCAAAAGAGCAATTTGAATATTGCAAAGA
ACATAGCTTAGAAATATTTAAACCAATAGAAATTAAACAAGGAAAAACAGTTATAAAAACAGTTACAAATAAAGAAAGTT
TTCGTAAAATTTCAATTAGACAACAATAA

Upstream 100 bases:

>100_bases
TTTTTGTTTCGAAGACAAATTTTTTGAGTATAGAGCTAACTACAGCATCTTTACAATTAAGAAAATATAAATTGATATAA
AAAGTTTAGGGGGATTGACT

Downstream 100 bases:

>100_bases
TATTTATTTATAAAAAGCTATTTGAATTATTATTCTTATAGCTTTTTTCTATTACATAAAAAAAGTGACCTTGTAATTGA
ATTATAAAATAAATTTAATT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLMRKLVNLLLIGIIGMLLGACSTNRTLNDFKNGKDKDTLQIPIVHDVYNYNGKPNADVLSIFNSNGDVRISKSETNDLK
VKTKLVQTKSIKDIDKKLNNLAIKPKIEKGVIFYEPLYTNNKNQNYWEWIKSSLNANGIQVNFDVQIPQTIKEVRIYSEL
GNINLQNISAKIHAQTNIGTITSANINPLDSAVFKANIPSRGENALDISLSSIDNVNSITAGVTSGNIVFNLPSGSEYIY
NQMDPKQMPVTYPYDMYSKEQFEYCKEHSLEIFKPIEIKQGKTVIKTVTNKESFRKISIRQQ

Sequences:

>Translated_302_residues
MLMRKLVNLLLIGIIGMLLGACSTNRTLNDFKNGKDKDTLQIPIVHDVYNYNGKPNADVLSIFNSNGDVRISKSETNDLK
VKTKLVQTKSIKDIDKKLNNLAIKPKIEKGVIFYEPLYTNNKNQNYWEWIKSSLNANGIQVNFDVQIPQTIKEVRIYSEL
GNINLQNISAKIHAQTNIGTITSANINPLDSAVFKANIPSRGENALDISLSSIDNVNSITAGVTSGNIVFNLPSGSEYIY
NQMDPKQMPVTYPYDMYSKEQFEYCKEHSLEIFKPIEIKQGKTVIKTVTNKESFRKISIRQQ
>Mature_302_residues
MLMRKLVNLLLIGIIGMLLGACSTNRTLNDFKNGKDKDTLQIPIVHDVYNYNGKPNADVLSIFNSNGDVRISKSETNDLK
VKTKLVQTKSIKDIDKKLNNLAIKPKIEKGVIFYEPLYTNNKNQNYWEWIKSSLNANGIQVNFDVQIPQTIKEVRIYSEL
GNINLQNISAKIHAQTNIGTITSANINPLDSAVFKANIPSRGENALDISLSSIDNVNSITAGVTSGNIVFNLPSGSEYIY
NQMDPKQMPVTYPYDMYSKEQFEYCKEHSLEIFKPIEIKQGKTVIKTVTNKESFRKISIRQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34070; Mature: 34070

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMRKLVNLLLIGIIGMLLGACSTNRTLNDFKNGKDKDTLQIPIVHDVYNYNGKPNADVL
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEEEHEECCCCCCCCCEE
SIFNSNGDVRISKSETNDLKVKTKLVQTKSIKDIDKKLNNLAIKPKIEKGVIFYEPLYTN
EEECCCCCEEEECCCCCCEEEEEEEHHHCCHHHHHHHHHCEEECCCCCCCEEEEECEECC
NKNQNYWEWIKSSLNANGIQVNFDVQIPQTIKEVRIYSELGNINLQNISAKIHAQTNIGT
CCCCHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCE
ITSANINPLDSAVFKANIPSRGENALDISLSSIDNVNSITAGVTSGNIVFNLPSGSEYIY
EEECCCCCCCHHEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCC
NQMDPKQMPVTYPYDMYSKEQFEYCKEHSLEIFKPIEIKQGKTVIKTVTNKESFRKISIR
CCCCCCCCCEECCCCCCCHHHHHHHHHCCCEEECCEEECCCCEEEEECCCCHHHEEEEEC
QQ
CC
>Mature Secondary Structure
MLMRKLVNLLLIGIIGMLLGACSTNRTLNDFKNGKDKDTLQIPIVHDVYNYNGKPNADVL
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEEEHEECCCCCCCCCEE
SIFNSNGDVRISKSETNDLKVKTKLVQTKSIKDIDKKLNNLAIKPKIEKGVIFYEPLYTN
EEECCCCCEEEECCCCCCEEEEEEEHHHCCHHHHHHHHHCEEECCCCCCCEEEEECEECC
NKNQNYWEWIKSSLNANGIQVNFDVQIPQTIKEVRIYSELGNINLQNISAKIHAQTNIGT
CCCCHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCE
ITSANINPLDSAVFKANIPSRGENALDISLSSIDNVNSITAGVTSGNIVFNLPSGSEYIY
EEECCCCCCCHHEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCC
NQMDPKQMPVTYPYDMYSKEQFEYCKEHSLEIFKPIEIKQGKTVIKTVTNKESFRKISIR
CCCCCCCCCEECCCCCCCHHHHHHHHHCCCEEECCEEECCCCEEEEECCCCHHHEEEEEC
QQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA