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The map label for this gene is etfB [H]

Identifier: 226948282

GI number: 226948282

Start: 1205645

End: 1206433

Strand: Direct

Name: etfB [H]

Synonym: CLM_1162

Alternate gene names: 226948282

Gene position: 1205645-1206433 (Clockwise)

Preceding gene: 226948281

Following gene: 226948283

Centisome position: 29.01

GC content: 33.97

Gene sequence:

>789_bases
ATGGATATTTTAGTATGTATAAAACAAGTTCCGGGAACATCAAAAGTAGAGGTAGATCCAGTAACAGGAGTATTGAAAAG
AGATGGTGTAGATTCAAAGATGAACCCATACGATCTATATGCTTTAGAAACAGCATTAAGACTTAAAGAAAAATTTGGAG
GAGTTGTAAAGGTAATAAGCATGGGACCTCCTCAAGCAGCAGAGGTTATAAAAGAAGCTTATATGATGGGAGCCGATGAA
GGGGTACTTCTTTCAGATAGAAAATTTGCAGGAGCGGATGTTTTATCAACAGCCTATACCATATCTCAAGGTGTAAGAGA
AATGGGTAAATTTGATCTAATACTTTGTGGAAAACAAACTACGGATGGTGATACGGCTCAAGTTGGACCAGAGATGGCGG
AATATTTAGATATAGCTCATATAGCAAATGTAATAAAAATAGAAGAAGTTAAAAATGATTCTGTAGTAGTGGAGATGGAT
ATGCCAAACACAATAGAAGTAGCAGAGATAAAATATCCTTGTCTTTTAACAGTAGAAAAAGATATATGTGAGCCAAGACT
TCCATCCTACAGAAAGAAACTAGAGACAAAGGATAAAGAAGTTAAAATGTTAAGCTTAAAAGATTTTAAAGATAAAAATG
AAAATATGTATGGATTAAATGGATCACCAACACAGGTAGAGAGAATATTTCCACCAGCAGTAAATACAGATAAAGAAATG
TGGACAGGGAGCGGAGAAGAATTAGGAAATAAGTTAACAGCAAAACTTAAAGAATTGAAATTTGTATAA

Upstream 100 bases:

>100_bases
GGGAAAAGACGCTAAAGTAGCGGTAATACCTGATGGCGTGTCTGTAATTGTAGGATAAAAATTTATTATTAAACATAAAT
AGATTTTGGAGGTAATTTAT

Downstream 100 bases:

>100_bases
AATAAAGTAATACTAATGGGAGGCTTTTAATATGGGAAAATTAGTAGTAAATGAAGAAAAATTAACTCCTTCAATTATAG
GGGAATTAGTTAAAATATGT

Product: electron transfer flavoprotein subunit beta/FixA family protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDILVCIKQVPGTSKVEVDPVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVISMGPPQAAEVIKEAYMMGADE
GVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQTTDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMD
MPNTIEVAEIKYPCLLTVEKDICEPRLPSYRKKLETKDKEVKMLSLKDFKDKNENMYGLNGSPTQVERIFPPAVNTDKEM
WTGSGEELGNKLTAKLKELKFV

Sequences:

>Translated_262_residues
MDILVCIKQVPGTSKVEVDPVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVISMGPPQAAEVIKEAYMMGADE
GVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQTTDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMD
MPNTIEVAEIKYPCLLTVEKDICEPRLPSYRKKLETKDKEVKMLSLKDFKDKNENMYGLNGSPTQVERIFPPAVNTDKEM
WTGSGEELGNKLTAKLKELKFV
>Mature_262_residues
MDILVCIKQVPGTSKVEVDPVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVISMGPPQAAEVIKEAYMMGADE
GVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQTTDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMD
MPNTIEVAEIKYPCLLTVEKDICEPRLPSYRKKLETKDKEVKMLSLKDFKDKNENMYGLNGSPTQVERIFPPAVNTDKEM
WTGSGEELGNKLTAKLKELKFV

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=218, Percent_Identity=32.1100917431193, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI62420877, Length=195, Percent_Identity=32.3076923076923, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI87081682, Length=233, Percent_Identity=30.9012875536481, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI2367123, Length=210, Percent_Identity=29.0476190476191, Blast_Score=76, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25141345, Length=213, Percent_Identity=30.5164319248826, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321646, Length=218, Percent_Identity=27.5229357798165, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24651147, Length=263, Percent_Identity=31.5589353612167, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24651145, Length=263, Percent_Identity=31.5589353612167, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29003; Mature: 29003

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILVCIKQVPGTSKVEVDPVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVIS
CCEEEEEECCCCCCEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
MGPPQAAEVIKEAYMMGADEGVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQT
CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCC
TDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMDMPNTIEVAEIKYPCLLTVEK
CCCCHHHCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCEEEEEECCCEEEEECH
DICEPRLPSYRKKLETKDKEVKMLSLKDFKDKNENMYGLNGSPTQVERIFPPAVNTDKEM
HHCCCCCHHHHHHHCCCCCCEEEEEHHCCCCCCCCEECCCCCCCHHHEECCCCCCCCHHH
WTGSGEELGNKLTAKLKELKFV
HCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDILVCIKQVPGTSKVEVDPVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVIS
CCEEEEEECCCCCCEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
MGPPQAAEVIKEAYMMGADEGVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQT
CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCC
TDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMDMPNTIEVAEIKYPCLLTVEK
CCCCHHHCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCEEEEEECCCEEEEECH
DICEPRLPSYRKKLETKDKEVKMLSLKDFKDKNENMYGLNGSPTQVERIFPPAVNTDKEM
HHCCCCCHHHHHHHCCCCCCEEEEEHHCCCCCCCCEECCCCCCCHHHEECCCCCCCCHHH
WTGSGEELGNKLTAKLKELKFV
HCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA