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The map label for this gene is 226948250

Identifier: 226948250

GI number: 226948250

Start: 1167593

End: 1168057

Strand: Direct

Name: 226948250

Synonym: CLM_1128

Alternate gene names: NA

Gene position: 1167593-1168057 (Clockwise)

Preceding gene: 226948249

Following gene: 226948255

Centisome position: 28.1

GC content: 28.17

Gene sequence:

>465_bases
ATGTTTAGTGAAATGAGAAGAAAAGATAGAGAACTGAAAAATGATGAAGCTATCGAAATTTTAAAGAACAATACTTATGG
TGTTCTGTCAACTATAAGTGAAAATGGCTACCCTTATGGTGTACCAATAAGTTATATCTTTTTCGATAATTCAATATATT
TTCATAGTGCTATTAAAGGACATAAACTAGATAATATATCAAATAACAATAGGGTGTCTTTTTGTGTAGTTGGACGAACT
CACATTCTACCTGACAAATTTAGTACAGAATATGAAAGTGTAATTGTGTTTGGAAGAGTAATTGAAGTTTCTAATGATGA
AAAAAACACGGCTCTATTAGAAATATTAAATAAATATTCAGCAGATTATATTGGACAAGGAAAAGAATACATTCAAAAGG
CAAGTAAAGCTACTAAAGTAATGAAAATTAATATAGAACATACTTCAGGAAAAGCTAAAAGATAG

Upstream 100 bases:

>100_bases
ATATAGAGAACATGGTATAATTTTAGTATCGATTAAATCATAATTATCTACTATTACGAACTAAACACTAGAAAATTTTA
AAATGATAAGGAGAATTATT

Downstream 100 bases:

>100_bases
GTAATGTAATTTATAATATTAAGTTTGTAATATTTTTATTTAATGTAATAACTGAAAAACAAACAATTTATTTAAACACC
GTATTATTTAAATTTGAATA

Product: putative nitroimidazole resistance protein NimA

Products: NA

Alternate protein names: 5-Nitroimidazole Antibiotic Resistance Protein; 5-Nitroimidazole Antibiotic Resistance Protein NimB; 5-Nitroimidazole Resistance Protein NimA; Antibiotic Resistance Protein; 5-Nitroimidazole Antibiotics Resistance Protein; Nitroimidazole Resistance Protein NimA; Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5\-Phosphate-Related Protein; 5-Nitroimidazole Reductase; Nitroimidazole Resistance-Like Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MFSEMRRKDRELKNDEAIEILKNNTYGVLSTISENGYPYGVPISYIFFDNSIYFHSAIKGHKLDNISNNNRVSFCVVGRT
HILPDKFSTEYESVIVFGRVIEVSNDEKNTALLEILNKYSADYIGQGKEYIQKASKATKVMKINIEHTSGKAKR

Sequences:

>Translated_154_residues
MFSEMRRKDRELKNDEAIEILKNNTYGVLSTISENGYPYGVPISYIFFDNSIYFHSAIKGHKLDNISNNNRVSFCVVGRT
HILPDKFSTEYESVIVFGRVIEVSNDEKNTALLEILNKYSADYIGQGKEYIQKASKATKVMKINIEHTSGKAKR
>Mature_154_residues
MFSEMRRKDRELKNDEAIEILKNNTYGVLSTISENGYPYGVPISYIFFDNSIYFHSAIKGHKLDNISNNNRVSFCVVGRT
HILPDKFSTEYESVIVFGRVIEVSNDEKNTALLEILNKYSADYIGQGKEYIQKASKATKVMKINIEHTSGKAKR

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17609; Mature: 17609

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSEMRRKDRELKNDEAIEILKNNTYGVLSTISENGYPYGVPISYIFFDNSIYFHSAIKG
CCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEECCEEEECCCCC
HKLDNISNNNRVSFCVVGRTHILPDKFSTEYESVIVFGRVIEVSNDEKNTALLEILNKYS
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHEEEEEEEEEEECCCCCHHHHHHHHHHHC
ADYIGQGKEYIQKASKATKVMKINIEHTSGKAKR
CCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MFSEMRRKDRELKNDEAIEILKNNTYGVLSTISENGYPYGVPISYIFFDNSIYFHSAIKG
CCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEECCEEEECCCCC
HKLDNISNNNRVSFCVVGRTHILPDKFSTEYESVIVFGRVIEVSNDEKNTALLEILNKYS
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHEEEEEEEEEEECCCCCHHHHHHHHHHHC
ADYIGQGKEYIQKASKATKVMKINIEHTSGKAKR
CCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA