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The map label for this gene is 226948244

Identifier: 226948244

GI number: 226948244

Start: 1162606

End: 1162746

Strand: Direct

Name: 226948244

Synonym: CLM_1122

Alternate gene names: NA

Gene position: 1162606-1162746 (Clockwise)

Preceding gene: 226948240

Following gene: 226948247

Centisome position: 27.98

GC content: 34.04

Gene sequence:

>141_bases
ATGTTGGAAAGTGTTGATTTTACAAAAAATGAACTTTTTGTTCCAATGGTATCTGCACCATCCATTGAATTTCAAGGAGC
TAAAATCAGTATTGTTCAGGCAGCTGATTTAATTGGTTTTTGGGGAATCATTGTTGAGTAG

Upstream 100 bases:

>100_bases
AAAAATAGTATGCAGACACTAGTGTATAAAGATATAAGGTCTGCTTTACAAAAGATAAAACAAGAGGTGAATATTTATTA
AAAACAATTTCTTTAAGACA

Downstream 100 bases:

>100_bases
TAATGAGATATAATTTTTATTATGTATATTATTTTTCTTGGACAACGCCCTAGTAATCCTTTGGCTACGTTAATAGCTGA
ATAGCCATATCATTTATAGA

Product: pentapeptide repeat family protein

Products: NA

Alternate protein names: Pentapeptide Repeat-Containing Protein

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MLESVDFTKNELFVPMVSAPSIEFQGAKISIVQAADLIGFWGIIVE

Sequences:

>Translated_46_residues
MLESVDFTKNELFVPMVSAPSIEFQGAKISIVQAADLIGFWGIIVE
>Mature_46_residues
MLESVDFTKNELFVPMVSAPSIEFQGAKISIVQAADLIGFWGIIVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5042; Mature: 5042

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESVDFTKNELFVPMVSAPSIEFQGAKISIVQAADLIGFWGIIVE
CCCCCCCCCCEEEEEEECCCCEEECCCEEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MLESVDFTKNELFVPMVSAPSIEFQGAKISIVQAADLIGFWGIIVE
CCCCCCCCCCEEEEEEECCCCEEECCCEEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA