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The map label for this gene is fecD [C]

Identifier: 226948242

GI number: 226948242

Start: 1159847

End: 1160926

Strand: Reverse

Name: fecD [C]

Synonym: CLM_1119

Alternate gene names: 226948242

Gene position: 1160926-1159847 (Counterclockwise)

Preceding gene: 226948243

Following gene: 226948241

Centisome position: 27.94

GC content: 30.19

Gene sequence:

>1080_bases
TTGGTGATAATAATGAATAATAATAAACAAATTTTAAAGTGCAAAAATAATTGCACTTTAAAATTTATTCTATTAATTAT
AGTCTTGTTTATAATAACTACGGTTTGCATAACCTTTGGTTCTGTAAAAATAGATGTAGGTGTAACCTTTAAATCCCTTA
TAAATAACATATTAAACAAAGAAATTTTTGCTAAAGATTGGCCAAATAATATTGATAATATAGTTTTTAAATTAAGACTT
CCAAGATTACTTTTAGCCATAGTTTCTGGTGGTGCTTTAGCCCTTGTGGGAATTTTAATGCAAACTTTAACTAGAAACTC
ATTAGCGGACCCATACATATTAGGCATATCCTCTGGTGCATCTGCAGGGGCTACCCTATCCATAGTATTAGGTGTTTTAA
GTTCTTTTGGACATTTTGGAATAGCCTTGGGAGCATTTTTAGGTGCTATGATTGCATCTATTATGGTATTTAAAATATCC
GGAGTAAGTAAAGTATACTCTAAAACTAAATTAATACTAACTGGAGTTGCTGTATCCTCTATATTTACTGCAGTAACAAA
CTTTATAATAACCTTTGCCAAAAATGATAGCTTAGTTAAAAGCGCAGTATTTTGGACTATTGGTAGTTTAGCAGGAGCAA
ATTATAATCAAGTAAAGTTTTCTCTTGTAATAATGGTTATAACCGCTATTTTAAGTATGTTATTATATAAGGATTTAGAT
GCTATGCTTTTAGGTGAAGCCGTAGCAAAAAATATAGGTATAAATACTAAATTTATAATTAGATTTATAATGATAGCTTC
CACACTCTTAACAGGTACTATAGTAGCTTTTACAGGCGTAATTGGATTTGTAGGCCTTATAGTTCCTCATATAGCAAGGC
AAATGGTAGGTTCTTCTCATAAAAAATTGATACCCTTTGGTATTGTTATTGGATCAATATTAATGGTAATTACAGATACT
ATAGCTAGAACTATATTATCTCCACAGGAAGTTCCTATAGGAATAATAACTGCATTTCTAGGAGGTCCTTTCTTCCTATA
TTTAATGCAAAAAAGCACCTATAGATTTGGAGGTAAGTAA

Upstream 100 bases:

>100_bases
CAAGTTTATAAAAGTTGAATTAACTGAATTATATCCTGGTGTAAGAGTTCCTAAAACTGTAAATAAATTAGCTAAAGAAT
TCTACCCAGATAAATTTTAG

Downstream 100 bases:

>100_bases
ATGAAATTAAAATTAGAAGGCATAAAATATGATATAGGTTCCAAAGAACTTTTACGTGGAATAGATTTAAATGTAAAGAA
AAACCATTTTGTTGGATTAA

Product: iron chelate uptake ABC transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MVIIMNNNKQILKCKNNCTLKFILLIIVLFIITTVCITFGSVKIDVGVTFKSLINNILNKEIFAKDWPNNIDNIVFKLRL
PRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKIS
GVSKVYSKTKLILTGVAVSSIFTAVTNFIITFAKNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLD
AMLLGEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGVIGFVGLIVPHIARQMVGSSHKKLIPFGIVIGSILMVITDT
IARTILSPQEVPIGIITAFLGGPFFLYLMQKSTYRFGGK

Sequences:

>Translated_359_residues
MVIIMNNNKQILKCKNNCTLKFILLIIVLFIITTVCITFGSVKIDVGVTFKSLINNILNKEIFAKDWPNNIDNIVFKLRL
PRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKIS
GVSKVYSKTKLILTGVAVSSIFTAVTNFIITFAKNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLD
AMLLGEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGVIGFVGLIVPHIARQMVGSSHKKLIPFGIVIGSILMVITDT
IARTILSPQEVPIGIITAFLGGPFFLYLMQKSTYRFGGK
>Mature_359_residues
MVIIMNNNKQILKCKNNCTLKFILLIIVLFIITTVCITFGSVKIDVGVTFKSLINNILNKEIFAKDWPNNIDNIVFKLRL
PRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKIS
GVSKVYSKTKLILTGVAVSSIFTAVTNFIITFAKNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLD
AMLLGEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGVIGFVGLIVPHIARQMVGSSHKKLIPFGIVIGSILMVITDT
IARTILSPQEVPIGIITAFLGGPFFLYLMQKSTYRFGGK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=288, Percent_Identity=35.0694444444444, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1788004, Length=301, Percent_Identity=31.2292358803987, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1790741, Length=285, Percent_Identity=30.5263157894737, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1786805, Length=298, Percent_Identity=34.8993288590604, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1786347, Length=283, Percent_Identity=30.0353356890459, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1786804, Length=337, Percent_Identity=26.7062314540059, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 38536; Mature: 38536

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIIMNNNKQILKCKNNCTLKFILLIIVLFIITTVCITFGSVKIDVGVTFKSLINNILNK
CEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHH
EIFAKDWPNNIDNIVFKLRLPRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
SAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKISGVSKVYSKTKLILTGVAVSS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IFTAVTNFIITFAKNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMLLGEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGVIGFVGLIVPHIARQMVGSSH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKLIPFGIVIGSILMVITDTIARTILSPQEVPIGIITAFLGGPFFLYLMQKSTYRFGGK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVIIMNNNKQILKCKNNCTLKFILLIIVLFIITTVCITFGSVKIDVGVTFKSLINNILNK
CEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHH
EIFAKDWPNNIDNIVFKLRLPRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
SAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKISGVSKVYSKTKLILTGVAVSS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IFTAVTNFIITFAKNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMLLGEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGVIGFVGLIVPHIARQMVGSSH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKLIPFGIVIGSILMVITDTIARTILSPQEVPIGIITAFLGGPFFLYLMQKSTYRFGGK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]