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The map label for this gene is ycaK [C]

Identifier: 226948124

GI number: 226948124

Start: 1050913

End: 1051482

Strand: Reverse

Name: ycaK [C]

Synonym: CLM_0992

Alternate gene names: 226948124

Gene position: 1051482-1050913 (Counterclockwise)

Preceding gene: 226948125

Following gene: 226948120

Centisome position: 25.3

GC content: 33.33

Gene sequence:

>570_bases
ATGGTAACAATTGTATTTGCACATCCATGGCATGGAAGTTTTAATAAGGCTATACTGGATACAGTAACAACTGTTTTAGA
ACAAAGGAACAATGAATACCAGGTAATTGATCTAAATAAAGAGAACTTTAATCCTATTATGACCGAAGGGGAATTGGCTT
TGTACTCAAAAGGACAACATAAGGATCCTTTAGTAACAAAATATCAAAACATGTTAAAAGAAACAGATGAAATTATTTTT
ATATTTCCCCTTTGGTGGTACGATACCCCTGCTATCTTTAAAGGTTTTCTTGATAAAGTTATGTTAAAAAATTTTGCATA
TACAGAATCAAATACAGGTTTAAAGGGAAAGCTAACTCATATTAAATCTGCCAAAGTTATAACAACGGGCCAATCTCCCC
GTTGGTATTTAAAGTATTTTGCTGGCAATCTGATTCAGAAAACATTTATCAATACTACATTAAAAGGTATTGGAATTAAA
AATGCTAAGTGGCTCCACTGCGGGGACGTTTCTAAGGGAGCTCAGGTGAAGAGGGAGAAATTTTTGCAAAGGTTGGCAAT
TGATATTTAA

Upstream 100 bases:

>100_bases
GCACATATAAGGTTCAGGTTTCTGAAAATGAGCAATCTAAAAAAGCTGCCTATACATTGGGAGCAGACATTTTAAAATAT
TAATTAAGAGGTGTTTCAAG

Downstream 100 bases:

>100_bases
GTTTGAACTCAATTCATATCCACAATATCCTAGAGCAGAATAGTGTTTCCTAGTTTTTCTTAGCATATCTGGTATCATCA
AATTAAATAACAAAATTGTA

Product: flavodoxin-like fold domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MVTIVFAHPWHGSFNKAILDTVTTVLEQRNNEYQVIDLNKENFNPIMTEGELALYSKGQHKDPLVTKYQNMLKETDEIIF
IFPLWWYDTPAIFKGFLDKVMLKNFAYTESNTGLKGKLTHIKSAKVITTGQSPRWYLKYFAGNLIQKTFINTTLKGIGIK
NAKWLHCGDVSKGAQVKREKFLQRLAIDI

Sequences:

>Translated_189_residues
MVTIVFAHPWHGSFNKAILDTVTTVLEQRNNEYQVIDLNKENFNPIMTEGELALYSKGQHKDPLVTKYQNMLKETDEIIF
IFPLWWYDTPAIFKGFLDKVMLKNFAYTESNTGLKGKLTHIKSAKVITTGQSPRWYLKYFAGNLIQKTFINTTLKGIGIK
NAKWLHCGDVSKGAQVKREKFLQRLAIDI
>Mature_189_residues
MVTIVFAHPWHGSFNKAILDTVTTVLEQRNNEYQVIDLNKENFNPIMTEGELALYSKGQHKDPLVTKYQNMLKETDEIIF
IFPLWWYDTPAIFKGFLDKVMLKNFAYTESNTGLKGKLTHIKSAKVITTGQSPRWYLKYFAGNLIQKTFINTTLKGIGIK
NAKWLHCGDVSKGAQVKREKFLQRLAIDI

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI4505415, Length=149, Percent_Identity=33.5570469798658, Blast_Score=67, Evalue=7e-12,
Organism=Escherichia coli, GI1787129, Length=111, Percent_Identity=34.2342342342342, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 21775; Mature: 21775

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTIVFAHPWHGSFNKAILDTVTTVLEQRNNEYQVIDLNKENFNPIMTEGELALYSKGQH
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCC
KDPLVTKYQNMLKETDEIIFIFPLWWYDTPAIFKGFLDKVMLKNFAYTESNTGLKGKLTH
CCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
IKSAKVITTGQSPRWYLKYFAGNLIQKTFINTTLKGIGIKNAKWLHCGDVSKGAQVKREK
ECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHH
FLQRLAIDI
HHHHHHCCC
>Mature Secondary Structure
MVTIVFAHPWHGSFNKAILDTVTTVLEQRNNEYQVIDLNKENFNPIMTEGELALYSKGQH
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCC
KDPLVTKYQNMLKETDEIIFIFPLWWYDTPAIFKGFLDKVMLKNFAYTESNTGLKGKLTH
CCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
IKSAKVITTGQSPRWYLKYFAGNLIQKTFINTTLKGIGIKNAKWLHCGDVSKGAQVKREK
ECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHH
FLQRLAIDI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]