| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is feoB2 [H]
Identifier: 226948096
GI number: 226948096
Start: 1020581
End: 1022104
Strand: Direct
Name: feoB2 [H]
Synonym: CLM_0959
Alternate gene names: 226948096
Gene position: 1020581-1022104 (Clockwise)
Preceding gene: 226948095
Following gene: 226948097
Centisome position: 24.56
GC content: 30.91
Gene sequence:
>1524_bases GTGAAAAAAATAGATAAGGATGAGAGTATAAAAAATACTAAAAATAAATTAAATATAAAATATTATGATAAGATAGATGA CAAAAAATATAAGATAAAGATCCAAAATGCTAAGTTAAACATAGAAACTAAGGATTCTAATAAGGATAAAAATCTAAAGG AGATTTTTAAGAATATAGAGAATTTCAAAGAGAATTACAATGAAAAAATAAGAGATGAAATAGTAAAAAGTATATATAAT AAGGCAGAAGATATTGCAGGTAATTCTGTTAAAAAGAATAGAGAAAAATTTTTATCACAACAAAAGATAGATGATATAGT AACTTCTAAAATTACGGGAATACCTATTATGCTTTTACTTTTAGCAGGAATCTTATGGATAACCATAGAAGGCGCCAATG TACCTTCAGAACTTTTAGCTAAAATGCTTTTTTTTATAGAAGATAAGCTTACACAATTTTTTAATTATATAGATGCACCT TCCTGGCTTCATGGTATCCTAGTTTTGGGGATATATAGAACTTTAGCTTGGGTTATATCTGTAATGTTACCACCTATGGC AATCTTTTTTCCTATATTTACTCTATTAGAGGATGCAGGCTACCTTCCAAGAATAGCTTTCAATTTGGATCATGCTTTTA AGAAGGCTTGTGCTCATGGGAAACAAGCTTTAACTATGTGTATGGGATTTGGCTGTAATGCAGCTGGAGTTATTGCCTGC AGAATAATAGAATCACCAAGGGAAAGATTGATAGCTATTTTAACTAATAACTTTGTACCTTGTAATGGCAGGTTTCCTAC GTTAATAGCACTTTCCATGATTTTTGTTGGATTAAAATTTGAAGGATCCGGGGGAAGTAGTTTTATAGCAACTCTTATGA TAGTTCTTCTTGTACTTATAGGAATAGGAATAACCCTGTTGGTTTCTTATATATTATCAAAAACATTGCTAAAGGGAGTT CCATCATCCTTTACTTTGGAATTACCACCCTATAGAAAGCCCCAAATAGGGAGAGTGATATATACATCAATTATAGATAG AACTATCTTCGTATTAATGAGAGCCGTAGTAGTGGCAGCACCAGCGGGAGCTATAATATATATTTTAGGAAATATAACTG TAGGAGATAGCACTATATTGGTTCAAGTAGCTAATGCCTTGGATCCTTTCAGTAAGGCTATTGGGTTAGATGGATTTATA CTTTTAGCCTTTATATTAGGACTTCCAGCCAATGAAATAGTGCTACCAATATTAATAATGTCTTATCTATCTAAGGGAGC TATGATAGATTTTGAAAGTTTAGAACAGCTAAGAAATATACTGATTTCAAATGGGTGGACCTACTTAACTTTATTAAATA CTATGTTATTTTCCCTTTTACATTTCCCTTGTGGAACCACCATATGGACTATAAAAAAAGAAACAGGAAGTATAAAATGG ACTATATTTTCAGTAATTATGCCTACGGTAATAGCTATATCTGTATGCTTCTTAACAACTCAAGTTTACAATTTAATAGT ATAA
Upstream 100 bases:
>100_bases TAGCTTTAAGATTATTAGATGGTGATGAGTCTATTTTAAATTCTATAAGTAAATATTTAAATTATGATATGAAAAGTGCT TTAATAAAGGGGGGATTAAG
Downstream 100 bases:
>100_bases AACTTAAAAGTAAATATATAATTTATCTTTTTGTGGGAGTTACTTTAGATAAGTCCTTTTAGATTCTGCATTAGTAGAGG ATTTATTTTTAAGTAAACTC
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIKIQNAKLNIETKDSNKDKNLKEIFKNIENFKENYNEKIRDEIVKSIYN KAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLLLAGILWITIEGANVPSELLAKMLFFIEDKLTQFFNYIDAP SWLHGILVLGIYRTLAWVISVMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLIGIGITLLVSYILSKTLLKGV PSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAAPAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFI LLAFILGLPANEIVLPILIMSYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW TIFSVIMPTVIAISVCFLTTQVYNLIV
Sequences:
>Translated_507_residues MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIKIQNAKLNIETKDSNKDKNLKEIFKNIENFKENYNEKIRDEIVKSIYN KAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLLLAGILWITIEGANVPSELLAKMLFFIEDKLTQFFNYIDAP SWLHGILVLGIYRTLAWVISVMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLIGIGITLLVSYILSKTLLKGV PSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAAPAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFI LLAFILGLPANEIVLPILIMSYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW TIFSVIMPTVIAISVCFLTTQVYNLIV >Mature_507_residues MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIKIQNAKLNIETKDSNKDKNLKEIFKNIENFKENYNEKIRDEIVKSIYN KAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLLLAGILWITIEGANVPSELLAKMLFFIEDKLTQFFNYIDAP SWLHGILVLGIYRTLAWVISVMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLIGIGITLLVSYILSKTLLKGV PSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAAPAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFI LLAFILGLPANEIVLPILIMSYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW TIFSVIMPTVIAISVCFLTTQVYNLIV
Specific function: Not involved in Fe(2+) uptake but is involved in manganese uptake. Could be GTP-driven [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=278, Percent_Identity=26.978417266187, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 56616; Mature: 56616
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIKIQNAKLNIETKDSNKDKNLKEIFKNIE CCCCCCCHHHHHHHHHCCEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCHHHHHHHHH NFKENYNEKIRDEIVKSIYNKAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LAGILWITIEGANVPSELLAKMLFFIEDKLTQFFNYIDAPSWLHGILVLGIYRTLAWVIS HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC HHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLI HHHHCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH GIGITLLVSYILSKTLLKGVPSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAA HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFILLAFILGLPANEIVLPILIM CCCEEEEEEECEEECCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH SYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW HHHCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH TIFSVIMPTVIAISVCFLTTQVYNLIV HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIKIQNAKLNIETKDSNKDKNLKEIFKNIE CCCCCCCHHHHHHHHHCCEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCHHHHHHHHH NFKENYNEKIRDEIVKSIYNKAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LAGILWITIEGANVPSELLAKMLFFIEDKLTQFFNYIDAPSWLHGILVLGIYRTLAWVIS HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC HHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLI HHHHCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH GIGITLLVSYILSKTLLKGVPSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAA HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFILLAFILGLPANEIVLPILIM CCCEEEEEEECEEECCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH SYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW HHHCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH TIFSVIMPTVIAISVCFLTTQVYNLIV HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]