| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226948004
Identifier: 226948004
GI number: 226948004
Start: 925145
End: 926890
Strand: Direct
Name: 226948004
Synonym: CLM_0865
Alternate gene names: NA
Gene position: 925145-926890 (Clockwise)
Preceding gene: 226948003
Following gene: 226948010
Centisome position: 22.26
GC content: 22.39
Gene sequence:
>1746_bases TTGAATGTTCAAAAGCAATTAAATGAACATTGTGATCAAGTATTATTAGAAATGGATATAAATAATGAAAAGATTATATT CAAAAGAAATCTTAAACGAAAACTCAAAAAAATTAGTATCTACTTTTGTTCATTAGAAAAAATATATGACTATACACCTA AAGTTGTAGATATTCAAGATGCTATGTTGATTATAATGAAAAAATTAAAGATAAATGAATATAAAAAACTTAAAAGTAAA ACTCATAGTAATGAACAAACATTAGAGATAATTTCGTTTAGAGATATTTTTAGATATGTATATATTAATCAACATATGTT AGGTACTGATGACTTTCTTAATAATAAATCTACCTTTAAAAAATATAAGAACCCGTATGCTTTTGAATTAATTTTTAATT TAATTGAGCAAGATAAAGACCAATTAAATCATCAATTAGTAAATGCAAAAAATAATTTAGAGAAGATAAGTAAAGAAATA TTTGGGTTAAAGTCTTATTTAGAAGATAAAGAAGCGGAAGATTTTTTACTTTTAGTTGCTGAAGAGAAAAATTTGAAAGA TAAGATTAATAAGCAATTAGAAGAAAAAAAATTAATAATAGAGAATAGCAATAATATAAGTACAGAAAATCAAATGTATA TAAACTTAAAAAATAGATTAATTAATGTTGCAAATAGAAAATCATATTTTGAAAAAAGAAAAGCTGAAATAAATATTTCT ATATCATCTAAAAAATTATTATTAAATGATTATATAGATGAAAAGAAAGATATTGAAGCTACTTTAGAAGTTAACTATAA ATTAACTGTAGATAATCAAATAATAGAGTGTCCTTTATGTGCTTCTAAAGTTCATAGTCATATAAAAAATAGTGATAAAC AATCTCAAGATGTTTTAAAAAATATTCAAAAAGACATAGATAGTAAAATTAAATTAGTTAAATCATTAATTGAAAAAGAT TTAAGCGAAATTAAGAATATTGATAGTAAAATTACTATCTTAAATGATGAACAAGCAGTGTATAATAAAGCAATTAATAA GTTTTCAGTAAAAACATCTGTTCCGTATTTAGCTCAAATTGATAGCATTAATAGTATTATCAACAGCTATGTGAAAAAAA CGGAAAGTGTTAGTGAGTGTATTAGATTACATAATAAAATTGATGAAAAAGATAAATTTATTAAAGAATTAGAAGATGAA ATTGTAAGCTTGGAAAAAAGAATTAAGGCATTAAAAATCAACGAAGATAATAAATCCAAAATATTTGATGTGTTAAATAA AAAATATAAGGAATATATGAAAAGATTTAAGTATGATGTTAATAATACTTATATTGATATAAATAATTATACTCCGTATC ATGATGGTGCAAGTATTTTTGAACATGAAAGTGGAGGATTACTTGAATGTATGCAAATTGCTTTCTTATGTGCAATTGTA ACAAGCAAAGATTATGGATATGCACAAGGACATCCAGGATTTATATTAATGGATACAATTAGTAAGTATATAGGAACAGT TATATCTGATGAAAATTCTGACGAAGATAGTAAAGGTAAGATAGATGATCCGGAGATTTATGAAGAGATTTATAAAATTT TCATTGAACTTAGTGGTAAATATCAGTTTATAATAGTTGAGAATACTCCACCTGTAAAATATAATAAATATGCTAAATAT ACTTTCTTAGCTGGTCAAGAAGGATTAATAAATTTAGATTTAAATGAATTAAAATTTGAAGAATAA
Upstream 100 bases:
>100_bases TAGTGACGGATTAACGATAATTAGAGGTGAAAAAACATCAGGAAAATCTTTAGTGTTGAGTTTAATTGATTATTGTTTGG GAAAAAGTGAAGGTATAAGG
Downstream 100 bases:
>100_bases ATTATTGGAGATTCAAATATATTTTTAAATATATATTATAAAGGTAATAAAGCCCTTACTTGTATTAAGTATACAGGTAA GAGTCTTTTATGTGTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MNVQKQLNEHCDQVLLEMDINNEKIIFKRNLKRKLKKISIYFCSLEKIYDYTPKVVDIQDAMLIIMKKLKINEYKKLKSK THSNEQTLEIISFRDIFRYVYINQHMLGTDDFLNNKSTFKKYKNPYAFELIFNLIEQDKDQLNHQLVNAKNNLEKISKEI FGLKSYLEDKEAEDFLLLVAEEKNLKDKINKQLEEKKLIIENSNNISTENQMYINLKNRLINVANRKSYFEKRKAEINIS ISSKKLLLNDYIDEKKDIEATLEVNYKLTVDNQIIECPLCASKVHSHIKNSDKQSQDVLKNIQKDIDSKIKLVKSLIEKD LSEIKNIDSKITILNDEQAVYNKAINKFSVKTSVPYLAQIDSINSIINSYVKKTESVSECIRLHNKIDEKDKFIKELEDE IVSLEKRIKALKINEDNKSKIFDVLNKKYKEYMKRFKYDVNNTYIDINNYTPYHDGASIFEHESGGLLECMQIAFLCAIV TSKDYGYAQGHPGFILMDTISKYIGTVISDENSDEDSKGKIDDPEIYEEIYKIFIELSGKYQFIIVENTPPVKYNKYAKY TFLAGQEGLINLDLNELKFEE
Sequences:
>Translated_581_residues MNVQKQLNEHCDQVLLEMDINNEKIIFKRNLKRKLKKISIYFCSLEKIYDYTPKVVDIQDAMLIIMKKLKINEYKKLKSK THSNEQTLEIISFRDIFRYVYINQHMLGTDDFLNNKSTFKKYKNPYAFELIFNLIEQDKDQLNHQLVNAKNNLEKISKEI FGLKSYLEDKEAEDFLLLVAEEKNLKDKINKQLEEKKLIIENSNNISTENQMYINLKNRLINVANRKSYFEKRKAEINIS ISSKKLLLNDYIDEKKDIEATLEVNYKLTVDNQIIECPLCASKVHSHIKNSDKQSQDVLKNIQKDIDSKIKLVKSLIEKD LSEIKNIDSKITILNDEQAVYNKAINKFSVKTSVPYLAQIDSINSIINSYVKKTESVSECIRLHNKIDEKDKFIKELEDE IVSLEKRIKALKINEDNKSKIFDVLNKKYKEYMKRFKYDVNNTYIDINNYTPYHDGASIFEHESGGLLECMQIAFLCAIV TSKDYGYAQGHPGFILMDTISKYIGTVISDENSDEDSKGKIDDPEIYEEIYKIFIELSGKYQFIIVENTPPVKYNKYAKY TFLAGQEGLINLDLNELKFEE >Mature_581_residues MNVQKQLNEHCDQVLLEMDINNEKIIFKRNLKRKLKKISIYFCSLEKIYDYTPKVVDIQDAMLIIMKKLKINEYKKLKSK THSNEQTLEIISFRDIFRYVYINQHMLGTDDFLNNKSTFKKYKNPYAFELIFNLIEQDKDQLNHQLVNAKNNLEKISKEI FGLKSYLEDKEAEDFLLLVAEEKNLKDKINKQLEEKKLIIENSNNISTENQMYINLKNRLINVANRKSYFEKRKAEINIS ISSKKLLLNDYIDEKKDIEATLEVNYKLTVDNQIIECPLCASKVHSHIKNSDKQSQDVLKNIQKDIDSKIKLVKSLIEKD LSEIKNIDSKITILNDEQAVYNKAINKFSVKTSVPYLAQIDSINSIINSYVKKTESVSECIRLHNKIDEKDKFIKELEDE IVSLEKRIKALKINEDNKSKIFDVLNKKYKEYMKRFKYDVNNTYIDINNYTPYHDGASIFEHESGGLLECMQIAFLCAIV TSKDYGYAQGHPGFILMDTISKYIGTVISDENSDEDSKGKIDDPEIYEEIYKIFIELSGKYQFIIVENTPPVKYNKYAKY TFLAGQEGLINLDLNELKFEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68055; Mature: 68055
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVQKQLNEHCDQVLLEMDINNEKIIFKRNLKRKLKKISIYFCSLEKIYDYTPKVVDIQD CCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHEEEEHHHHHCCCCCEEEHHH AMLIIMKKLKINEYKKLKSKTHSNEQTLEIISFRDIFRYVYINQHMLGTDDFLNNKSTFK HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHH KYKNPYAFELIFNLIEQDKDQLNHQLVNAKNNLEKISKEIFGLKSYLEDKEAEDFLLLVA HHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE EEKNLKDKINKQLEEKKLIIENSNNISTENQMYINLKNRLINVANRKSYFEKRKAEINIS CCCCHHHHHHHHHHHCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEE ISSKKLLLNDYIDEKKDIEATLEVNYKLTVDNQIIECPLCASKVHSHIKNSDKQSQDVLK ECCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCEEECCCHHHHHHHHHHCCCHHHHHHHH NIQKDIDSKIKLVKSLIEKDLSEIKNIDSKITILNDEQAVYNKAINKFSVKTSVPYLAQI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHEEECCCCCHHHHH DSINSIINSYVKKTESVSECIRLHNKIDEKDKFIKELEDEIVSLEKRIKALKINEDNKSK HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH IFDVLNKKYKEYMKRFKYDVNNTYIDINNYTPYHDGASIFEHESGGLLECMQIAFLCAIV HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH TSKDYGYAQGHPGFILMDTISKYIGTVISDENSDEDSKGKIDDPEIYEEIYKIFIELSGK HCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCC YQFIIVENTPPVKYNKYAKYTFLAGQEGLINLDLNELKFEE EEEEEEECCCCCCCCCCEEEEEEECCCCEEECCHHHCCCCC >Mature Secondary Structure MNVQKQLNEHCDQVLLEMDINNEKIIFKRNLKRKLKKISIYFCSLEKIYDYTPKVVDIQD CCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHEEEEHHHHHCCCCCEEEHHH AMLIIMKKLKINEYKKLKSKTHSNEQTLEIISFRDIFRYVYINQHMLGTDDFLNNKSTFK HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHH KYKNPYAFELIFNLIEQDKDQLNHQLVNAKNNLEKISKEIFGLKSYLEDKEAEDFLLLVA HHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE EEKNLKDKINKQLEEKKLIIENSNNISTENQMYINLKNRLINVANRKSYFEKRKAEINIS CCCCHHHHHHHHHHHCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEE ISSKKLLLNDYIDEKKDIEATLEVNYKLTVDNQIIECPLCASKVHSHIKNSDKQSQDVLK ECCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCEEECCCHHHHHHHHHHCCCHHHHHHHH NIQKDIDSKIKLVKSLIEKDLSEIKNIDSKITILNDEQAVYNKAINKFSVKTSVPYLAQI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHEEECCCCCHHHHH DSINSIINSYVKKTESVSECIRLHNKIDEKDKFIKELEDEIVSLEKRIKALKINEDNKSK HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH IFDVLNKKYKEYMKRFKYDVNNTYIDINNYTPYHDGASIFEHESGGLLECMQIAFLCAIV HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH TSKDYGYAQGHPGFILMDTISKYIGTVISDENSDEDSKGKIDDPEIYEEIYKIFIELSGK HCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCC YQFIIVENTPPVKYNKYAKYTFLAGQEGLINLDLNELKFEE EEEEEEECCCCCCCCCCEEEEEEECCCCEEECCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA