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The map label for this gene is 226947925

Identifier: 226947925

GI number: 226947925

Start: 842727

End: 843698

Strand: Direct

Name: 226947925

Synonym: CLM_0783

Alternate gene names: NA

Gene position: 842727-843698 (Clockwise)

Preceding gene: 226947924

Following gene: 226947926

Centisome position: 20.28

GC content: 29.73

Gene sequence:

>972_bases
ATGAAAAAGCTGGTAACAGGAATATTATTAACAATTAGTATTTTAACTTTAGCAGCCTGTGGAAAGACAACAAAAAAGGA
TAAGGTTTTGAATATAGGAATAAATCAAATAGTAGAATATGTGGCATTAGATGATAATAGAAAGGGATTTATAAAAGCTC
TTGAGGAGGCTGGATATAAAGATGGAGATAATATAAAAATAGATTATAAAAATGCTCAAGGAGATATAGGGGTGTCCCAA
ACTATAGCTAAAAAATTTGCTTCAGATAAAAAGGATTTGGTTTTTGCCATAGGAACACCTGCTGCTCAGAGTGTATTTAA
TGCTACAAAACAAACTCCTATAATAATTAGTGCGGTTACTGATCCAATAAAAGCGGGACTTGTTAATTCTTTAGAAAAAC
CAGGTAAGAACGTGTCAGGAACTATAGATTATTTACCTGTGGAAAACCAGTTAAAATTATTAAAGAATCTTGTACCAAAA
GCAAAGAAAATAGGATTTATATATAATACAAGTGAAATTAATTCAGGAGTACAATTAAATGAATTAAAAAAAGCTGCAAA
GGGATATGAGATTATAGAAACAGGGGTAACAAGTACTAATGAAATAAATAATGCTATAGCTAATTTAGTAAATAAGATAG
ATGTTTTATATGTACCAACAGACCAATTAGTAGTATCATCTATGCCTATAATAGCAAAGCATACTCTAGATGCTAAAATA
CCTATAATTGCAGCGGAAAAGGGAAGTGTAGAAGCTGGAGCATTGGCAACAGTGGGAATTGATTACTATCAATTAGGTTA
TGAAACTGGGAAAATGGCAGTACCAGTATTAAAAGGAGAAGATATTTCTAAAATGCCAATAAAAATGACAAGTAAAACAG
AAATATATATAAACAAAAATAGTTTAGAGAAATTAGGTATTGATAAAGGGAATTTAGGTAATTTAGGAAATGTTAAGTAT
ATAGAAAAATAA

Upstream 100 bases:

>100_bases
TTTAAATGAGAAAGAAAAGAGAACTTTAACAGTAGAAGATATATTAAAGAAATTTGAATATGCAGTTTAAAAAATATAAA
TATTAAAGGAGATGTATATT

Downstream 100 bases:

>100_bases
AGAACAAGCATACATGAGGTATGTAAATAATAACGATATAACTGTAGATGGAGCAGGAGTTGGACTTTCAGCAGATTCTG
ATATAGAAAATGAAAAGCTT

Product: putative ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKLVTGILLTISILTLAACGKTTKKDKVLNIGINQIVEYVALDDNRKGFIKALEEAGYKDGDNIKIDYKNAQGDIGVSQ
TIAKKFASDKKDLVFAIGTPAAQSVFNATKQTPIIISAVTDPIKAGLVNSLEKPGKNVSGTIDYLPVENQLKLLKNLVPK
AKKIGFIYNTSEINSGVQLNELKKAAKGYEIIETGVTSTNEINNAIANLVNKIDVLYVPTDQLVVSSMPIIAKHTLDAKI
PIIAAEKGSVEAGALATVGIDYYQLGYETGKMAVPVLKGEDISKMPIKMTSKTEIYINKNSLEKLGIDKGNLGNLGNVKY
IEK

Sequences:

>Translated_323_residues
MKKLVTGILLTISILTLAACGKTTKKDKVLNIGINQIVEYVALDDNRKGFIKALEEAGYKDGDNIKIDYKNAQGDIGVSQ
TIAKKFASDKKDLVFAIGTPAAQSVFNATKQTPIIISAVTDPIKAGLVNSLEKPGKNVSGTIDYLPVENQLKLLKNLVPK
AKKIGFIYNTSEINSGVQLNELKKAAKGYEIIETGVTSTNEINNAIANLVNKIDVLYVPTDQLVVSSMPIIAKHTLDAKI
PIIAAEKGSVEAGALATVGIDYYQLGYETGKMAVPVLKGEDISKMPIKMTSKTEIYINKNSLEKLGIDKGNLGNLGNVKY
IEK
>Mature_323_residues
MKKLVTGILLTISILTLAACGKTTKKDKVLNIGINQIVEYVALDDNRKGFIKALEEAGYKDGDNIKIDYKNAQGDIGVSQ
TIAKKFASDKKDLVFAIGTPAAQSVFNATKQTPIIISAVTDPIKAGLVNSLEKPGKNVSGTIDYLPVENQLKLLKNLVPK
AKKIGFIYNTSEINSGVQLNELKKAAKGYEIIETGVTSTNEINNAIANLVNKIDVLYVPTDQLVVSSMPIIAKHTLDAKI
PIIAAEKGSVEAGALATVGIDYYQLGYETGKMAVPVLKGEDISKMPIKMTSKTEIYINKNSLEKLGIDKGNLGNLGNVKY
IEK

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007487 [H]

Pfam domain/function: PF04392 ABC_sub_bind [H]

EC number: NA

Molecular weight: Translated: 34784; Mature: 34784

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVTGILLTISILTLAACGKTTKKDKVLNIGINQIVEYVALDDNRKGFIKALEEAGYK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHCCCC
DGDNIKIDYKNAQGDIGVSQTIAKKFASDKKDLVFAIGTPAAQSVFNATKQTPIIISAVT
CCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEECC
DPIKAGLVNSLEKPGKNVSGTIDYLPVENQLKLLKNLVPKAKKIGFIYNTSEINSGVQLN
CHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCCHHHHEEEEEEHHHCCCCCCHH
ELKKAAKGYEIIETGVTSTNEINNAIANLVNKIDVLYVPTDQLVVSSMPIIAKHTLDAKI
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCEEEEECCCHHHHHCCCEEEEECCCCCC
PIIAAEKGSVEAGALATVGIDYYQLGYETGKMAVPVLKGEDISKMPIKMTSKTEIYINKN
EEEEECCCCCCCCCEEEECCHHHEECCCCCCEEEEEECCCCCCCCCEEECCCEEEEEECC
SLEKLGIDKGNLGNLGNVKYIEK
CHHHHCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MKKLVTGILLTISILTLAACGKTTKKDKVLNIGINQIVEYVALDDNRKGFIKALEEAGYK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHCCCC
DGDNIKIDYKNAQGDIGVSQTIAKKFASDKKDLVFAIGTPAAQSVFNATKQTPIIISAVT
CCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEECC
DPIKAGLVNSLEKPGKNVSGTIDYLPVENQLKLLKNLVPKAKKIGFIYNTSEINSGVQLN
CHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCCHHHHEEEEEEHHHCCCCCCHH
ELKKAAKGYEIIETGVTSTNEINNAIANLVNKIDVLYVPTDQLVVSSMPIIAKHTLDAKI
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCEEEEECCCHHHHHCCCEEEEECCCCCC
PIIAAEKGSVEAGALATVGIDYYQLGYETGKMAVPVLKGEDISKMPIKMTSKTEIYINKN
EEEEECCCCCCCCCEEEECCHHHEECCCCCCEEEEEECCCCCCCCCEEECCCEEEEEECC
SLEKLGIDKGNLGNLGNVKYIEK
CHHHHCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]