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The map label for this gene is 226947923

Identifier: 226947923

GI number: 226947923

Start: 841085

End: 841978

Strand: Direct

Name: 226947923

Synonym: CLM_0781

Alternate gene names: NA

Gene position: 841085-841978 (Clockwise)

Preceding gene: 226947922

Following gene: 226947924

Centisome position: 20.24

GC content: 28.3

Gene sequence:

>894_bases
ATGGAAGTAGTATCAAGTATATTAATGCAGAGTTTAATTTTATCAATTATGGTGATGGGGGTATACATAAGTTATAAAAT
ACTAGATTTCCCCGATATGTCTGCAGATGGAAGCTTTACATTAGGAGCAGCTATAGTTGCTGTATTATTAACAAAAGGAG
TGTCTCCAATTACTGCTAGTATAGTTGCTTTAATAGGTGGATTAGTGGCAGGATTACTTACAGGAATACTTAATGTAAAA
ATTAAAATATCAAATTTGCTTTCTGGAATTTTAGTAATGGGAATATTGTACTCATTTAATTTAAGAATTATGGGAAAGGC
TAACATTCCAATATTTAGTGAAAAAAATATATTTTATGATTTTAATCCCCTAATGATTATGTTGTTTATTGTAATATTAA
TTAAAATTCTAATTGATTTATTTTTAAAAACAGGATTAGGCTATTTACTAAAAGGAGTTGGAGATAATTCTCAAATGATT
AAGTCTTTGGGTATAGAAGTTGGGAAAATTAAAATACTAGGACTTATGCTATCTAATGGACTTATAGCTTTTTCAGGGGG
AATTATGGCTCAATATCAAGGTTTTAGTGATGCTTCTATGGGAATAGGAACTTTGATATTGGGAATAGCTTCAATAATTA
TTGGAACATCTATAATTAAAAGAAAATCATTTATTAAGGAAACTAGCATGGTAATTATGGGGACGATTATTTACCAAGGA
ACAATATATTTAGCTATGACTTTAGGCCTTACTACAGTGGATTTGAAGATGATAACATCACTAATTATCATAGTATTTTT
GGCTCTTAGAGAAATTGATAACAAATATGAAGAAAAAAGTTGGAGGTGGATTAAAAATGTTAGAAATTCAAAATTTATCA
AAAAGCTTTCATAA

Upstream 100 bases:

>100_bases
GTGGCTTTTTCGATTCTCAGATATTATTTATTTGTACTTTCTAAAAGCCACATGGGTAACATGTGGTTTTTTTGTACCTA
AAAATAGAGAGGAGAATTTT

Downstream 100 bases:

>100_bases
CTCTTATATGGGTGAAAATAAATTATTTTATAACTTAAATTTGACTATTAATGAAGGAGATTTTGTAAGCATAATTGGAA
GTAATGGTACAGGTAAGTCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MEVVSSILMQSLILSIMVMGVYISYKILDFPDMSADGSFTLGAAIVAVLLTKGVSPITASIVALIGGLVAGLLTGILNVK
IKISNLLSGILVMGILYSFNLRIMGKANIPIFSEKNIFYDFNPLMIMLFIVILIKILIDLFLKTGLGYLLKGVGDNSQMI
KSLGIEVGKIKILGLMLSNGLIAFSGGIMAQYQGFSDASMGIGTLILGIASIIIGTSIIKRKSFIKETSMVIMGTIIYQG
TIYLAMTLGLTTVDLKMITSLIIIVFLALREIDNKYEEKSWRWIKNVRNSKFIKKLS

Sequences:

>Translated_297_residues
MEVVSSILMQSLILSIMVMGVYISYKILDFPDMSADGSFTLGAAIVAVLLTKGVSPITASIVALIGGLVAGLLTGILNVK
IKISNLLSGILVMGILYSFNLRIMGKANIPIFSEKNIFYDFNPLMIMLFIVILIKILIDLFLKTGLGYLLKGVGDNSQMI
KSLGIEVGKIKILGLMLSNGLIAFSGGIMAQYQGFSDASMGIGTLILGIASIIIGTSIIKRKSFIKETSMVIMGTIIYQG
TIYLAMTLGLTTVDLKMITSLIIIVFLALREIDNKYEEKSWRWIKNVRNSKFIKKLS
>Mature_297_residues
MEVVSSILMQSLILSIMVMGVYISYKILDFPDMSADGSFTLGAAIVAVLLTKGVSPITASIVALIGGLVAGLLTGILNVK
IKISNLLSGILVMGILYSFNLRIMGKANIPIFSEKNIFYDFNPLMIMLFIVILIKILIDLFLKTGLGYLLKGVGDNSQMI
KSLGIEVGKIKILGLMLSNGLIAFSGGIMAQYQGFSDASMGIGTLILGIASIIIGTSIIKRKSFIKETSMVIMGTIIYQG
TIYLAMTLGLTTVDLKMITSLIIIVFLALREIDNKYEEKSWRWIKNVRNSKFIKKLS

Specific function: Unknown

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32326; Mature: 32326

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVVSSILMQSLILSIMVMGVYISYKILDFPDMSADGSFTLGAAIVAVLLTKGVSPITAS
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
IVALIGGLVAGLLTGILNVKIKISNLLSGILVMGILYSFNLRIMGKANIPIFSEKNIFYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCEEEE
FNPLMIMLFIVILIKILIDLFLKTGLGYLLKGVGDNSQMIKSLGIEVGKIKILGLMLSNG
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHCCCHHHHHEEHHHHHCC
LIAFSGGIMAQYQGFSDASMGIGTLILGIASIIIGTSIIKRKSFIKETSMVIMGTIIYQG
EEEECCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIYLAMTLGLTTVDLKMITSLIIIVFLALREIDNKYEEKSWRWIKNVRNSKFIKKLS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEVVSSILMQSLILSIMVMGVYISYKILDFPDMSADGSFTLGAAIVAVLLTKGVSPITAS
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
IVALIGGLVAGLLTGILNVKIKISNLLSGILVMGILYSFNLRIMGKANIPIFSEKNIFYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCEEEE
FNPLMIMLFIVILIKILIDLFLKTGLGYLLKGVGDNSQMIKSLGIEVGKIKILGLMLSNG
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHCCCHHHHHEEHHHHHCC
LIAFSGGIMAQYQGFSDASMGIGTLILGIASIIIGTSIIKRKSFIKETSMVIMGTIIYQG
EEEECCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIYLAMTLGLTTVDLKMITSLIIIVFLALREIDNKYEEKSWRWIKNVRNSKFIKKLS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]