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The map label for this gene is trpH [H]

Identifier: 226947911

GI number: 226947911

Start: 829516

End: 830334

Strand: Direct

Name: trpH [H]

Synonym: CLM_0769

Alternate gene names: 226947911

Gene position: 829516-830334 (Clockwise)

Preceding gene: 226947910

Following gene: 226947912

Centisome position: 19.96

GC content: 28.08

Gene sequence:

>819_bases
ATGATATACGCTGATTTGCACGTACACACAAATCATAGTGATGGTATTTGTGAAATTGCTAATGTTCTTGATATGGCTAA
AAAGAAAGGAATAAAAGCAATAGCTATTACTGATCATGATACTGTTGATCAATTTGATGAAATTAATGAATTAGGCAGAA
AAATGGATCTTGAAGTAGTAAAGGGTATAGAAATGAGTTGTTATGATTATGATGTGTTTAAAAAGGTTCATATTGTTGGA
TTATGGCTTAATAAAAATGCTACACATGTAAAAGAATTATGTGATAAGACTTTAAAATGTAGAGATAATTATCATAGAGA
TCTAATAAAAGAATTGTCTGAAAAGGGATATGATATAACATATGAAGATGCTAAAAAATATTCCAAATACAGTATTGTTT
TTAAAATGAATATTTTTCAAGCTCTAAAAGAAAAATATAAAGATGAGATGACAAAAGAAAGATATAATGAGCTTTTTGCT
TCAAAAACATCAAAGGAAACTGATTTAAAGATGGGATATACTCCTGTAATGAACGGGATTGAAGCAATAAAAAAAGATGG
TGGTATACCAATTATTGCTCATCCTTGCCAATATGATAATTATGATGAGATTGAAAAATATGTTGAGTATGGATTACAGG
GAATTGAAATAAATCATTCAAAGATGAAGAAAATAGATTACAAAAAAACCTTGAATTTTGCAGCTAAATATAACTTAGCC
AAAAGTGGAGGAAGTGATTTTCATGACCCAGATTTAATTGAATTTGGGTGCTATGGTTTAACCAAAGAGCAGTATGAAGA
ATTAAAACATTTTAGATAA

Upstream 100 bases:

>100_bases
TTATAACTAATAGTAATGATTATATGGATGTATTGCCAACTAATAAGAACAAAGTTGACAAAGAAGATGTTTTATTGACA
GTAATTTAGGAGGAATATAT

Downstream 100 bases:

>100_bases
ATTACGGCAGGGCTTCTACGGAGGATGAAGATACTTACTAATAGTAAAGAAAAGCAAAATAGAACAAAACTATTTAATGA
TACTAATATATATCAAGAAA

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIYADLHVHTNHSDGICEIANVLDMAKKKGIKAIAITDHDTVDQFDEINELGRKMDLEVVKGIEMSCYDYDVFKKVHIVG
LWLNKNATHVKELCDKTLKCRDNYHRDLIKELSEKGYDITYEDAKKYSKYSIVFKMNIFQALKEKYKDEMTKERYNELFA
SKTSKETDLKMGYTPVMNGIEAIKKDGGIPIIAHPCQYDNYDEIEKYVEYGLQGIEINHSKMKKIDYKKTLNFAAKYNLA
KSGGSDFHDPDLIEFGCYGLTKEQYEELKHFR

Sequences:

>Translated_272_residues
MIYADLHVHTNHSDGICEIANVLDMAKKKGIKAIAITDHDTVDQFDEINELGRKMDLEVVKGIEMSCYDYDVFKKVHIVG
LWLNKNATHVKELCDKTLKCRDNYHRDLIKELSEKGYDITYEDAKKYSKYSIVFKMNIFQALKEKYKDEMTKERYNELFA
SKTSKETDLKMGYTPVMNGIEAIKKDGGIPIIAHPCQYDNYDEIEKYVEYGLQGIEINHSKMKKIDYKKTLNFAAKYNLA
KSGGSDFHDPDLIEFGCYGLTKEQYEELKHFR
>Mature_272_residues
MIYADLHVHTNHSDGICEIANVLDMAKKKGIKAIAITDHDTVDQFDEINELGRKMDLEVVKGIEMSCYDYDVFKKVHIVG
LWLNKNATHVKELCDKTLKCRDNYHRDLIKELSEKGYDITYEDAKKYSKYSIVFKMNIFQALKEKYKDEMTKERYNELFA
SKTSKETDLKMGYTPVMNGIEAIKKDGGIPIIAHPCQYDNYDEIEKYVEYGLQGIEINHSKMKKIDYKKTLNFAAKYNLA
KSGGSDFHDPDLIEFGCYGLTKEQYEELKHFR

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=274, Percent_Identity=27.007299270073, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31639; Mature: 31639

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYADLHVHTNHSDGICEIANVLDMAKKKGIKAIAITDHDTVDQFDEINELGRKMDLEVV
CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
KGIEMSCYDYDVFKKVHIVGLWLNKNATHVKELCDKTLKCRDNYHRDLIKELSEKGYDIT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
YEDAKKYSKYSIVFKMNIFQALKEKYKDEMTKERYNELFASKTSKETDLKMGYTPVMNGI
HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
EAIKKDGGIPIIAHPCQYDNYDEIEKYVEYGLQGIEINHSKMKKIDYKKTLNFAAKYNLA
HHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCC
KSGGSDFHDPDLIEFGCYGLTKEQYEELKHFR
CCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MIYADLHVHTNHSDGICEIANVLDMAKKKGIKAIAITDHDTVDQFDEINELGRKMDLEVV
CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
KGIEMSCYDYDVFKKVHIVGLWLNKNATHVKELCDKTLKCRDNYHRDLIKELSEKGYDIT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
YEDAKKYSKYSIVFKMNIFQALKEKYKDEMTKERYNELFASKTSKETDLKMGYTPVMNGI
HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
EAIKKDGGIPIIAHPCQYDNYDEIEKYVEYGLQGIEINHSKMKKIDYKKTLNFAAKYNLA
HHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCC
KSGGSDFHDPDLIEFGCYGLTKEQYEELKHFR
CCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]