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The map label for this gene is ygjQ [H]

Identifier: 226947902

GI number: 226947902

Start: 811993

End: 812661

Strand: Direct

Name: ygjQ [H]

Synonym: CLM_0758

Alternate gene names: 226947902

Gene position: 811993-812661 (Clockwise)

Preceding gene: 226947901

Following gene: 226947904

Centisome position: 19.54

GC content: 29.9

Gene sequence:

>669_bases
TTGAAAAACAAAATAAAAAGGATATTCATGGTTATTATGGTAATAGTTTTAATGGGGACAGCAGCAATATTTTTTATTGA
TTTTAGGGTAAGATCAGAAAGTAAAAAATACATTGTAAATCCTAAAGATGTTCCAGAAGCAGAGGCAATTTTAGTATTAG
GAGCTTATGTCAAGCCAAATGGTAAACTTTGTGATATGTTAGAGGATAGAGTAGCAGTTGGAATAGATTTATATAAAAAT
AACAAGGCGAAAAAACTATTATTTAGCGGAGACCATGGACAAGCTAATTATGATGAAGTAAATGGAATGAAGAAAGTTGC
TGAAAAGAAAGGGGTTAAAAAGGAGGATATATTTTTAGATCATGCTGGATTTAGTACCTATGAAAGTATGTATAGAGCAA
AAGAGATTTTTAAAGCTAAAAAAATAATAATTGTAACTCAACAATACCATCTTATGAGGGCTGTGTATATAGCAAGACAA
CTTGGATTAGATGCCTATGGAGTAAATTCAGATCAAAGAAATTATTGGGGAATAGATAAATATAAAACTAGAGAAATTGC
AGCAAGAGTAAAGGACTATTTTAATGTTAATTTAATTAAACCAAAACCTAAACATCTAGGAGATACCATACCTGTAAGTG
GAAATGGTATAGTTACACATGATAAGTAA

Upstream 100 bases:

>100_bases
TATAAAAGATATTATAAACATGATGATAGTATAATAAATAATGAATACTAGAAATCTTATGAATAGTTATGTCGGGGTAT
ATCAGTGGAGGTGCAAAACT

Downstream 100 bases:

>100_bases
GTAGAGGGTAACAGCTACTTGTAAAAGAATGTAAGGGTAAAAATAAACTCCAGTAGTTATTAATATATAGCTACTGGAAT
TTTATATGGTATAATGAATT

Product: putative SanA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKNKIKRIFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVLGAYVKPNGKLCDMLEDRVAVGIDLYKN
NKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKIIIVTQQYHLMRAVYIARQ
LGLDAYGVNSDQRNYWGIDKYKTREIAARVKDYFNVNLIKPKPKHLGDTIPVSGNGIVTHDK

Sequences:

>Translated_222_residues
MKNKIKRIFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVLGAYVKPNGKLCDMLEDRVAVGIDLYKN
NKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKIIIVTQQYHLMRAVYIARQ
LGLDAYGVNSDQRNYWGIDKYKTREIAARVKDYFNVNLIKPKPKHLGDTIPVSGNGIVTHDK
>Mature_222_residues
MKNKIKRIFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVLGAYVKPNGKLCDMLEDRVAVGIDLYKN
NKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKIIIVTQQYHLMRAVYIARQ
LGLDAYGVNSDQRNYWGIDKYKTREIAARVKDYFNVNLIKPKPKHLGDTIPVSGNGIVTHDK

Specific function: Unknown

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli sanA [H]

Homologues:

Organism=Escherichia coli, GI1789468, Length=216, Percent_Identity=33.7962962962963, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788466, Length=222, Percent_Identity=29.7297297297297, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 25325; Mature: 25325

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKIKRIFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVLGAYVKPN
CCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCC
GKLCDMLEDRVAVGIDLYKNNKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLD
CCHHHHHHHHHHEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHEEEE
HAGFSTYESMYRAKEIFKAKKIIIVTQQYHLMRAVYIARQLGLDAYGVNSDQRNYWGIDK
CCCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
YKTREIAARVKDYFNVNLIKPKPKHLGDTIPVSGNGIVTHDK
HHHHHHHHHHHHHHCEEEECCCHHHCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MKNKIKRIFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVLGAYVKPN
CCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCC
GKLCDMLEDRVAVGIDLYKNNKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLD
CCHHHHHHHHHHEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHEEEE
HAGFSTYESMYRAKEIFKAKKIIIVTQQYHLMRAVYIARQLGLDAYGVNSDQRNYWGIDK
CCCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
YKTREIAARVKDYFNVNLIKPKPKHLGDTIPVSGNGIVTHDK
HHHHHHHHHHHHHHCEEEECCCHHHCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]