Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
---|---|
Accession | NC_012563 |
Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is 226947899
Identifier: 226947899
GI number: 226947899
Start: 809640
End: 811214
Strand: Direct
Name: 226947899
Synonym: CLM_0755
Alternate gene names: NA
Gene position: 809640-811214 (Clockwise)
Preceding gene: 226947898
Following gene: 226947900
Centisome position: 19.48
GC content: 26.03
Gene sequence:
>1575_bases ATGCTATATTTAAGATTTGGTAAAAGTCTTTTTATATCTATGTTTGAAAAATATTATGATATAAATAAGAAAGATAAATT TGAAGAATTATTTGGTGATATATATATAGGTAAAAATCCTACGGAAGAGAGAAATAGTTTTCTTGTATGGAAAATAAGTT TTGCTGGAGTAGATGCAGGACATGGTGAAGAAGAATTAAGAAATAGTTTTAACTCAAAAGTTTTGTTATCTGCAATAAAA TTTATAAATAAATACTCAAATTTATTAGATGTTGATACTATTCCAAAAGGAATGGAAAGTGCAGAAGTAATAGTACAATA TATATCTTTATTAGCTAGTAAAATAAATATACCTGTATTTGTTTTAATAGATGAATATGATAATTTTGCTAATGAATTGA TTACAGGGGGAAAACAAAGTACTTATAGTGGAATACTTCATGGTGAGGGTTTTGTGAAGGTATTTTATAAAGCTATAAAA GATTCTACAGCAGATAATTTTAATAGAATATTTATGACTGGGGTAAGTCCAATAATGCTAGATGATTTAACTAGCGGATT TAACATAACAAGGAACTATACTTTAGATAAAAATCTTAATGCTATGATGGGATTTACACAAGACGAAATTTATTCTATTA TGGATCAAGTTGGAATAACAGATAAACCAATTAGAGAAAAGATATATACAGATATGAAGCAATATTATAATGGATATAAA TTTAATGAAGACAGCAAATCAGTTTTTAATCCAGATATGTCTATGTATTTTTTAGATAATTATTTGGCTTATAATGAGTA TCCTAAAGAAATGATAGATAATAATGTGAAAACTGATTATGGAAAAGTTAATCAGTTAGCTTATAATTTTAACGATAGAG AAGCTCTAGAAGAAATAATGACAACAGGAGAAACCTCTACTATGTTAGTAGATAGATTTAATATTCATACTATGTATAGT GTAAAAGAAAACTTTAAATCCTTATTATTTTATCTTGGAATGTTAACTATAAAAGGCCAAGGATTGGGAGGAACAGTTCT CAAGATACCTAACTATGTTATAAAGACAATATATTGGGAACAATATTTCCAAAGAATAAATGAAGATTATAATATACAGA TGAAAGATGTTAGGGATGCAATAATCCAAATGAGGGTTTATGGAAATATTCAGCCTTTGATAGAACTTGTAGGTACTATA TTAGAGTATTTATCTAATAGAGATTTAATAAAAATGGATGAAAAAAATATAAAGATGATACTACTTACATTATTAGGTGT AGACAGCACTTATTTTATAAAAAGTGAAGATAAGAATAATAAGGGCTACGTAGATATAATGCTTAAAAGAAAGATTCAGT TTAAAGATATAACTAAATTTCAGTGGATTATAGAACTAAAATATATAAAGGAAAGTGATAAAAATACCTTAGAAAAAGTA AAAGAAGAAGGACTAAACCAGCTTAAGGGATATGCTGAAAGTAAAATGGTAAAAGAGGAACTTGGAACAGATAATTTAAA GAAAGCCTTAGTTATTGTAGTAGGAAAAAAAGATATTTATACTGTAGAGTTATAA
Upstream 100 bases:
>100_bases TTTGTTATTTAAAAAGTGTTTCATTATCTCCAGCAGCACGAACGTTTTTAGAAACCCTATAAAACTCTGCCTATTATTCA AATATTATTATATATAGGGT
Downstream 100 bases:
>100_bases TATTTTCTAATAACTCATCATCCATAACTTCTGAATTAGCAATTATATTAAATAAATATAGTAGACATTTATACAGATAA AATTACTTTTAGTTTTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MLYLRFGKSLFISMFEKYYDINKKDKFEELFGDIYIGKNPTEERNSFLVWKISFAGVDAGHGEEELRNSFNSKVLLSAIK FINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVFVLIDEYDNFANELITGGKQSTYSGILHGEGFVKVFYKAIK DSTADNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDKNLNAMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYK FNEDSKSVFNPDMSMYFLDNYLAYNEYPKEMIDNNVKTDYGKVNQLAYNFNDREALEEIMTTGETSTMLVDRFNIHTMYS VKENFKSLLFYLGMLTIKGQGLGGTVLKIPNYVIKTIYWEQYFQRINEDYNIQMKDVRDAIIQMRVYGNIQPLIELVGTI LEYLSNRDLIKMDEKNIKMILLTLLGVDSTYFIKSEDKNNKGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTLEKV KEEGLNQLKGYAESKMVKEELGTDNLKKALVIVVGKKDIYTVEL
Sequences:
>Translated_524_residues MLYLRFGKSLFISMFEKYYDINKKDKFEELFGDIYIGKNPTEERNSFLVWKISFAGVDAGHGEEELRNSFNSKVLLSAIK FINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVFVLIDEYDNFANELITGGKQSTYSGILHGEGFVKVFYKAIK DSTADNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDKNLNAMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYK FNEDSKSVFNPDMSMYFLDNYLAYNEYPKEMIDNNVKTDYGKVNQLAYNFNDREALEEIMTTGETSTMLVDRFNIHTMYS VKENFKSLLFYLGMLTIKGQGLGGTVLKIPNYVIKTIYWEQYFQRINEDYNIQMKDVRDAIIQMRVYGNIQPLIELVGTI LEYLSNRDLIKMDEKNIKMILLTLLGVDSTYFIKSEDKNNKGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTLEKV KEEGLNQLKGYAESKMVKEELGTDNLKKALVIVVGKKDIYTVEL >Mature_524_residues MLYLRFGKSLFISMFEKYYDINKKDKFEELFGDIYIGKNPTEERNSFLVWKISFAGVDAGHGEEELRNSFNSKVLLSAIK FINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVFVLIDEYDNFANELITGGKQSTYSGILHGEGFVKVFYKAIK DSTADNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDKNLNAMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYK FNEDSKSVFNPDMSMYFLDNYLAYNEYPKEMIDNNVKTDYGKVNQLAYNFNDREALEEIMTTGETSTMLVDRFNIHTMYS VKENFKSLLFYLGMLTIKGQGLGGTVLKIPNYVIKTIYWEQYFQRINEDYNIQMKDVRDAIIQMRVYGNIQPLIELVGTI LEYLSNRDLIKMDEKNIKMILLTLLGVDSTYFIKSEDKNNKGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTLEKV KEEGLNQLKGYAESKMVKEELGTDNLKKALVIVVGKKDIYTVEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60888; Mature: 60888
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLRFGKSLFISMFEKYYDINKKDKFEELFGDIYIGKNPTEERNSFLVWKISFAGVDAG CEEEEECHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCCCCCEEEEEEEEECCCCC HGEEELRNSFNSKVLLSAIKFINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVF CCHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEE VLIDEYDNFANELITGGKQSTYSGILHGEGFVKVFYKAIKDSTADNFNRIFMTGVSPIML EEEECHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHH DDLTSGFNITRNYTLDKNLNAMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYK HHCCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC FNEDSKSVFNPDMSMYFLDNYLAYNEYPKEMIDNNVKTDYGKVNQLAYNFNDREALEEIM CCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHEEECCCHHHHHHHHH TTGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKGQGLGGTVLKIPNYVIKTIYWE HCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHCCHHHHHHHHHH QYFQRINEDYNIQMKDVRDAIIQMRVYGNIQPLIELVGTILEYLSNRDLIKMDEKNIKMI HHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH LLTLLGVDSTYFIKSEDKNNKGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTLEKV EEEHHCCCCEEEEECCCCCCCCEEEEEEECCCCHHHCCCEEEEEEEEEHHCCCHHHHHHH KEEGLNQLKGYAESKMVKEELGTDNLKKALVIVVGKKDIYTVEL HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEC >Mature Secondary Structure MLYLRFGKSLFISMFEKYYDINKKDKFEELFGDIYIGKNPTEERNSFLVWKISFAGVDAG CEEEEECHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCCCCCEEEEEEEEECCCCC HGEEELRNSFNSKVLLSAIKFINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVF CCHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEE VLIDEYDNFANELITGGKQSTYSGILHGEGFVKVFYKAIKDSTADNFNRIFMTGVSPIML EEEECHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHH DDLTSGFNITRNYTLDKNLNAMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYK HHCCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC FNEDSKSVFNPDMSMYFLDNYLAYNEYPKEMIDNNVKTDYGKVNQLAYNFNDREALEEIM CCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHEEECCCHHHHHHHHH TTGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKGQGLGGTVLKIPNYVIKTIYWE HCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHCCHHHHHHHHHH QYFQRINEDYNIQMKDVRDAIIQMRVYGNIQPLIELVGTILEYLSNRDLIKMDEKNIKMI HHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH LLTLLGVDSTYFIKSEDKNNKGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTLEKV EEEHHCCCCEEEEECCCCCCCCEEEEEEECCCCHHHCCCEEEEEEEEEHHCCCHHHHHHH KEEGLNQLKGYAESKMVKEELGTDNLKKALVIVVGKKDIYTVEL HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA