Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
---|---|
Accession | NC_012563 |
Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is 226947894
Identifier: 226947894
GI number: 226947894
Start: 804733
End: 805221
Strand: Direct
Name: 226947894
Synonym: CLM_0750
Alternate gene names: NA
Gene position: 804733-805221 (Clockwise)
Preceding gene: 226947893
Following gene: 226947895
Centisome position: 19.37
GC content: 30.47
Gene sequence:
>489_bases ATGAATAAGGAAGAATTAAAGACTATTAAGCAGGCTATAATAAATGAAAATGAAGGTTATGAATTTTATAAAATGGTGTC AAAAGATACAAATTCAGAAGAGGCTAAAAAAGCATTCCTAGAATTGGCAGAAGAAGAATTAAAACATGTGAAATGGTTAA AAGATTTATTCACTAAACTAAAAGATAATAAAATGGATAGCATAGACTTAAAAGAGATTCAAGTAGCTTCACCAAAGATA TTTGCTTGGGAAAATCTAGATAGGGAAGGTGCTTCAAAAGCAGTGTCAGTATTTGGTATAGGGATTCAAATGGAAAGAGA TTCTGTAGACTTTTATAAAAAGGCTGCTAAAGATACAGAAATTCAACAGGCTAAAGTAATATATGAAGAATTAGCTAAGT GGGAACAAAGTCACTTAGAACAATTTTATAAAGAATATGAAACATTAATGGAAGAATGGTGGAGTGAGCAAGGATTCGAG CCATTTTAA
Upstream 100 bases:
>100_bases GTAATATTTTTGTGCTAAAACCACTATATTTCAAAAAGCCTAGAGTGATCAATGTTCATATAATTTCACAGAACTTACTA TAAATATAGGAGGTAAAATT
Downstream 100 bases:
>100_bases ATAATAAAATTACCTGCATCTTAATTTTAGATGCAGGTTTTTAAATTATAAGAGAATGTAAATAAATTGTATATAAAAGT ATAAAAATTTCATCTTAGAT
Product: putative rubrerythrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNKEELKTIKQAIINENEGYEFYKMVSKDTNSEEAKKAFLELAEEELKHVKWLKDLFTKLKDNKMDSIDLKEIQVASPKI FAWENLDREGASKAVSVFGIGIQMERDSVDFYKKAAKDTEIQQAKVIYEELAKWEQSHLEQFYKEYETLMEEWWSEQGFE PF
Sequences:
>Translated_162_residues MNKEELKTIKQAIINENEGYEFYKMVSKDTNSEEAKKAFLELAEEELKHVKWLKDLFTKLKDNKMDSIDLKEIQVASPKI FAWENLDREGASKAVSVFGIGIQMERDSVDFYKKAAKDTEIQQAKVIYEELAKWEQSHLEQFYKEYETLMEEWWSEQGFE PF >Mature_162_residues MNKEELKTIKQAIINENEGYEFYKMVSKDTNSEEAKKAFLELAEEELKHVKWLKDLFTKLKDNKMDSIDLKEIQVASPKI FAWENLDREGASKAVSVFGIGIQMERDSVDFYKKAAKDTEIQQAKVIYEELAKWEQSHLEQFYKEYETLMEEWWSEQGFE PF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19223; Mature: 19223
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEELKTIKQAIINENEGYEFYKMVSKDTNSEEAKKAFLELAEEELKHVKWLKDLFTKL CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDNKMDSIDLKEIQVASPKIFAWENLDREGASKAVSVFGIGIQMERDSVDFYKKAAKDTE HCCCCCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCHH IQQAKVIYEELAKWEQSHLEQFYKEYETLMEEWWSEQGFEPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNKEELKTIKQAIINENEGYEFYKMVSKDTNSEEAKKAFLELAEEELKHVKWLKDLFTKL CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDNKMDSIDLKEIQVASPKIFAWENLDREGASKAVSVFGIGIQMERDSVDFYKKAAKDTE HCCCCCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCHH IQQAKVIYEELAKWEQSHLEQFYKEYETLMEEWWSEQGFEPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA