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The map label for this gene is 226947886

Identifier: 226947886

GI number: 226947886

Start: 797859

End: 798332

Strand: Reverse

Name: 226947886

Synonym: CLM_0742

Alternate gene names: NA

Gene position: 798332-797859 (Counterclockwise)

Preceding gene: 226947887

Following gene: 226947882

Centisome position: 19.21

GC content: 43.04

Gene sequence:

>474_bases
ATGCAATACAGAATGAAAACTCACCCTTTATCAGAAGAACAGTTGAATGATTTATCGTCAAGAGTACAAACGGGCAGCTT
GGCAACCCTCAATGCAGACGGCACCCCATATAATACGCCGGTTCACTTTGTCCATATAAATGAGTGCATTTATGTTCATG
GGCTGCCGAAGGGACAAAAGATTGACAATATCATTCGTGACAGTAAAGTAGGATTTACCATGTATGATATGCAGGAGCTC
CTGCTTGATGCAAACGGTAAGCCCTGTGATACGAATACAAAATATGAGAGTGCAATTGCAACAGGAAGCGCCGCTTTGGT
CGATGACATGGGAGAGAAAAAAATGGTGCTACAGAAAATTGTGGAAAAATATACTCCCCATTTGATGGACGCACCGCTTC
CCGAAAATATGGTCCGAGGTACTGCCGTAATACGAATCAGCATTGCTGAGTTGACGGGCAAGTATTATGAATGA

Upstream 100 bases:

>100_bases
TTACCTGCGAGATGTTTTCTCATTGCAGTCATGCTCTTTCACTGGTGGTACTTCTTTTTTCGTATTAAAACAAAATAGCT
AACTACAGGAGGATATTGAT

Downstream 100 bases:

>100_bases
TCTCTTTTTATAAATATTCGCCCTCGCACAACAAATAACAAAAGCGAACGCCAGACACAAATCCATTGTCTGGCGTTCAC
TTTTTCCTAAATACAGATAA

Product: putative 5-nitroimidazole antibiotic resistance protein

Products: NA

Alternate protein names: 5-Nitroimidazole Antibiotic Resistance Protein; Pyridoxamine 5\-Phosphate-Related Protein; 5-Nitroimidazole Antibiotic Resistance Protein NimB; 5-Nitroimidazole Reductase; 5-Nitroimidazole Resistance Protein NimA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MQYRMKTHPLSEEQLNDLSSRVQTGSLATLNADGTPYNTPVHFVHINECIYVHGLPKGQKIDNIIRDSKVGFTMYDMQEL
LLDANGKPCDTNTKYESAIATGSAALVDDMGEKKMVLQKIVEKYTPHLMDAPLPENMVRGTAVIRISIAELTGKYYE

Sequences:

>Translated_157_residues
MQYRMKTHPLSEEQLNDLSSRVQTGSLATLNADGTPYNTPVHFVHINECIYVHGLPKGQKIDNIIRDSKVGFTMYDMQEL
LLDANGKPCDTNTKYESAIATGSAALVDDMGEKKMVLQKIVEKYTPHLMDAPLPENMVRGTAVIRISIAELTGKYYE
>Mature_157_residues
MQYRMKTHPLSEEQLNDLSSRVQTGSLATLNADGTPYNTPVHFVHINECIYVHGLPKGQKIDNIIRDSKVGFTMYDMQEL
LLDANGKPCDTNTKYESAIATGSAALVDDMGEKKMVLQKIVEKYTPHLMDAPLPENMVRGTAVIRISIAELTGKYYE

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17549; Mature: 17549

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYRMKTHPLSEEQLNDLSSRVQTGSLATLNADGTPYNTPVHFVHINECIYVHGLPKGQK
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCEEEEECCCCCCH
IDNIIRDSKVGFTMYDMQELLLDANGKPCDTNTKYESAIATGSAALVDDMGEKKMVLQKI
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCHHHHHHHH
VEKYTPHLMDAPLPENMVRGTAVIRISIAELTGKYYE
HHHHCCCCCCCCCCHHHHCCEEEEEEEHHHHCCCCCC
>Mature Secondary Structure
MQYRMKTHPLSEEQLNDLSSRVQTGSLATLNADGTPYNTPVHFVHINECIYVHGLPKGQK
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCEEEEECCCCCCH
IDNIIRDSKVGFTMYDMQELLLDANGKPCDTNTKYESAIATGSAALVDDMGEKKMVLQKI
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCHHHHHHHH
VEKYTPHLMDAPLPENMVRGTAVIRISIAELTGKYYE
HHHHCCCCCCCCCCHHHHCCEEEEEEEHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA