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The map label for this gene is 226947857

Identifier: 226947857

GI number: 226947857

Start: 766408

End: 766800

Strand: Direct

Name: 226947857

Synonym: CLM_0712

Alternate gene names: NA

Gene position: 766408-766800 (Clockwise)

Preceding gene: 226947856

Following gene: 226947858

Centisome position: 18.44

GC content: 29.26

Gene sequence:

>393_bases
ATGGCGTTTAGTAATAAATTATATTCTTTGAGAAAGCAAAAAGGATTATCACAAGACGAATTAGGTAGCAAGTTAAATGT
TTCAAGACAAACCATTTCTAAGTGGGAACTTGGCGAAACTACACCAGAACTAGAAAAATTAATAGCTTTAGGAGACTTTT
TTGAAATATCTCTAGATGAATTAGTAATGGACGTAAAAGCAAAAGAGAGTACAAAGACAGAACCATTAGTAATGAATAGG
TTTGAAACAATAATTGATAGCATTGATCGAGAAAATGTTAAGATGTATACAAAGAAAATATCCAAAATAGTACTAATAAT
TATGGTAATAATTCTTGCTATTGACTTGATTTCGATGATTGTGTACTTTATACTTAATGGTTTTCCGGTATAA

Upstream 100 bases:

>100_bases
TGGCACATATGGAATAGAGGCTGGGCTAATTTGTACAATAGTATTAATTTTGTTTGCTATAGTATTAGATAGAAAAGTTA
AGAGGTAAAGAGGTAGGGCA

Downstream 100 bases:

>100_bases
ACAATTATATAGTAGATGATTTTTTCCTAACCAATAGAATATAATAACAACAAATAAATTTAACCCTTATTTTGTTTTAG
AAGTATTGAATCAATTAAAT

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcription Regulator

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDELVMDVKAKESTKTEPLVMNR
FETIIDSIDRENVKMYTKKISKIVLIIMVIILAIDLISMIVYFILNGFPV

Sequences:

>Translated_130_residues
MAFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDELVMDVKAKESTKTEPLVMNR
FETIIDSIDRENVKMYTKKISKIVLIIMVIILAIDLISMIVYFILNGFPV
>Mature_129_residues
AFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDELVMDVKAKESTKTEPLVMNRF
ETIIDSIDRENVKMYTKKISKIVLIIMVIILAIDLISMIVYFILNGFPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14876; Mature: 14745

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDE
CCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LVMDVKAKESTKTEPLVMNRFETIIDSIDRENVKMYTKKISKIVLIIMVIILAIDLISMI
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYFILNGFPV
HHHHHHCCCC
>Mature Secondary Structure 
AFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDE
CCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LVMDVKAKESTKTEPLVMNRFETIIDSIDRENVKMYTKKISKIVLIIMVIILAIDLISMI
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYFILNGFPV
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA