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The map label for this gene is 226947828

Identifier: 226947828

GI number: 226947828

Start: 737220

End: 737432

Strand: Direct

Name: 226947828

Synonym: CLM_0683

Alternate gene names: NA

Gene position: 737220-737432 (Clockwise)

Preceding gene: 226947825

Following gene: 226947829

Centisome position: 17.74

GC content: 30.99

Gene sequence:

>213_bases
GTGAAAAATAAGGTAAAAGAATTACGAACTGCATCCAATATGACACAACAGCAGCTTGCTGATTTAGTTTCAGTTTCTTC
AAGAACCATTATTTCACTTGAAAAAGGACAGTACAATCCATCAATTATGCTGGCATATAAGATAGCTATTGTTTTTAACA
CCACTATTGAAGATTTATATTGTTTAAGGGAGAATTTGGAAAATGAAGATTAA

Upstream 100 bases:

>100_bases
TTTATTAGTTAATAATTGACAATATACTTATACAATGATAATATGAAGTTAACTTCACATGAAGCTTGCTTCATATTATT
TATTTTAGGGAGGTGTATAA

Downstream 100 bases:

>100_bases
AATATATAATAAAAAGAAATTTTTAAGCGGTATGGCATTTTTATTATTAGCAGCAATTAGTATTCCATTTATAATTGCAC
GTTTTAGTAATCTAGACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MKNKVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIAIVFNTTIEDLYCLRENLENED

Sequences:

>Translated_70_residues
MKNKVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIAIVFNTTIEDLYCLRENLENED
>Mature_70_residues
MKNKVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIAIVFNTTIEDLYCLRENLENED

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8025; Mature: 8025

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIAIVFNTTIEDLY
CCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEEEECCHHHHHH
CLRENLENED
HHHHHCCCCC
>Mature Secondary Structure
MKNKVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIAIVFNTTIEDLY
CCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEEEECCHHHHHH
CLRENLENED
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]