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The map label for this gene is yqkD [H]

Identifier: 226947800

GI number: 226947800

Start: 703296

End: 704204

Strand: Direct

Name: yqkD [H]

Synonym: CLM_0650

Alternate gene names: 226947800

Gene position: 703296-704204 (Clockwise)

Preceding gene: 226947799

Following gene: 226947801

Centisome position: 16.93

GC content: 27.72

Gene sequence:

>909_bases
ATGAAAGTAATATTATTGATTTTATTAGTATTATTATTGACTATAGTTTTTGTTGTATCTTGGAGATTAACTAATGTAGT
TATTTATCCGATAGTGAGAAAAGCAGAATTTACTTATCAAAAGGAAATAGAGCAGGGTGGATTTGTAGAAGAAGAATTTA
ATAAATTAAAAAGAGAAGAAATTACTATAAAATCTCCCTTTGAATATGACTTGAAGGGAATGTATTTCCCAGGAAAAAAT
TCAAAGAAAACTGTGATAATATGTCATGGAATTAAGTGCAATTTATATAATTCCGTGAAATATATGAAAATATTTATGGA
TAAAGGCTTTAATGGAGTAATATATGATCATAGAAATCATGGAAGTAGTGGTGGAGAAAACACTACCTTTGGTTATTATG
AAAAACAAGATTTAAAAGCTGTTGCAGATTGGGTGTTTGAAAGAAATGGTGAAGATTCTATAGTTGGCATTCATGGAGAA
TCTATGGGAGCAGGTACTATACTTCAAAACGCAGCTATTGATGATAGAATAGCGTTTTATGTAGCAGATTGTCCATATTC
CAGTATGAAAGGCATATTACAGCTAAGGCTAAAAAGAGATTATAAATTACCTAGCTTTCCATTTATACCTGTAGCAAGCT
TTATAAGTAAATTAAGAGTTGGATTATTTTTTTCACAAGTGTCTCCTATAAAAGATATAAAAAGAGTAGAGACACCTATA
CTTTTTATACATGGTATGGAAGATGAATATATACCAAAGGAAATGAGCATAGATATGTACAAAAATAAAAAAATAGGAAT
AAAAGATATATATTTAGCTCCTAATGCAGATCATGCAGAGTCTTATATAAAGAATAAAAAAGAATATAAAGAGCATATAT
ATGAATTTTTAAAGAAAATAAATTTATAA

Upstream 100 bases:

>100_bases
AAAAGTTTATGATGGAAAATAAGAAAAAGATATAAAACCATTAAATTTAAAAATTGTTAGTACATAAGAGTAATATCAGT
TTGATAGTTAGGGGGATAAT

Downstream 100 bases:

>100_bases
TAATAGATTTAATTTTAATGAAGTAAAGATAAAAATACATTTCATGGTTTATGAAATGTATTTTTATCCTAGCGGTGTTA
AATTTAAATCTATTTTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKVILLILLVLLLTIVFVVSWRLTNVVIYPIVRKAEFTYQKEIEQGGFVEEEFNKLKREEITIKSPFEYDLKGMYFPGKN
SKKTVIICHGIKCNLYNSVKYMKIFMDKGFNGVIYDHRNHGSSGGENTTFGYYEKQDLKAVADWVFERNGEDSIVGIHGE
SMGAGTILQNAAIDDRIAFYVADCPYSSMKGILQLRLKRDYKLPSFPFIPVASFISKLRVGLFFSQVSPIKDIKRVETPI
LFIHGMEDEYIPKEMSIDMYKNKKIGIKDIYLAPNADHAESYIKNKKEYKEHIYEFLKKINL

Sequences:

>Translated_302_residues
MKVILLILLVLLLTIVFVVSWRLTNVVIYPIVRKAEFTYQKEIEQGGFVEEEFNKLKREEITIKSPFEYDLKGMYFPGKN
SKKTVIICHGIKCNLYNSVKYMKIFMDKGFNGVIYDHRNHGSSGGENTTFGYYEKQDLKAVADWVFERNGEDSIVGIHGE
SMGAGTILQNAAIDDRIAFYVADCPYSSMKGILQLRLKRDYKLPSFPFIPVASFISKLRVGLFFSQVSPIKDIKRVETPI
LFIHGMEDEYIPKEMSIDMYKNKKIGIKDIYLAPNADHAESYIKNKKEYKEHIYEFLKKINL
>Mature_302_residues
MKVILLILLVLLLTIVFVVSWRLTNVVIYPIVRKAEFTYQKEIEQGGFVEEEFNKLKREEITIKSPFEYDLKGMYFPGKN
SKKTVIICHGIKCNLYNSVKYMKIFMDKGFNGVIYDHRNHGSSGGENTTFGYYEKQDLKAVADWVFERNGEDSIVGIHGE
SMGAGTILQNAAIDDRIAFYVADCPYSSMKGILQLRLKRDYKLPSFPFIPVASFISKLRVGLFFSQVSPIKDIKRVETPI
LFIHGMEDEYIPKEMSIDMYKNKKIGIKDIYLAPNADHAESYIKNKKEYKEHIYEFLKKINL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 34924; Mature: 34924

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVILLILLVLLLTIVFVVSWRLTNVVIYPIVRKAEFTYQKEIEQGGFVEEEFNKLKREE
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
ITIKSPFEYDLKGMYFPGKNSKKTVIICHGIKCNLYNSVKYMKIFMDKGFNGVIYDHRNH
EEEECCCCCCCCEEEECCCCCCEEEEEEECCEECCCCCCEEEHHEECCCCCEEEEECCCC
GSSGGENTTFGYYEKQDLKAVADWVFERNGEDSIVGIHGESMGAGTILQNAAIDDRIAFY
CCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCCCCCEEEEE
VADCPYSSMKGILQLRLKRDYKLPSFPFIPVASFISKLRVGLFFSQVSPIKDIKRVETPI
EECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCE
LFIHGMEDEYIPKEMSIDMYKNKKIGIKDIYLAPNADHAESYIKNKKEYKEHIYEFLKKI
EEEECCCCCCCCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
NL
CC
>Mature Secondary Structure
MKVILLILLVLLLTIVFVVSWRLTNVVIYPIVRKAEFTYQKEIEQGGFVEEEFNKLKREE
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
ITIKSPFEYDLKGMYFPGKNSKKTVIICHGIKCNLYNSVKYMKIFMDKGFNGVIYDHRNH
EEEECCCCCCCCEEEECCCCCCEEEEEEECCEECCCCCCEEEHHEECCCCCEEEEECCCC
GSSGGENTTFGYYEKQDLKAVADWVFERNGEDSIVGIHGESMGAGTILQNAAIDDRIAFY
CCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCCCCCEEEEE
VADCPYSSMKGILQLRLKRDYKLPSFPFIPVASFISKLRVGLFFSQVSPIKDIKRVETPI
EECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCE
LFIHGMEDEYIPKEMSIDMYKNKKIGIKDIYLAPNADHAESYIKNKKEYKEHIYEFLKKI
EEEECCCCCCCCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
NL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]