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The map label for this gene is 226947701

Identifier: 226947701

GI number: 226947701

Start: 594458

End: 595351

Strand: Direct

Name: 226947701

Synonym: CLM_0548

Alternate gene names: NA

Gene position: 594458-595351 (Clockwise)

Preceding gene: 226947700

Following gene: 226947702

Centisome position: 14.31

GC content: 27.52

Gene sequence:

>894_bases
ATGCTTAAAAGAGATACTAGGGTTCAAATTGTTATTGTGGAAAATGGGAAGTATGCACTATTAAAACATTGGGTTAAATT
AGAAAATAGATATTTTTGGGCTTTGCCTGGTGGAGGAAGAGAAAAGGGTGAAAGCTTAGAAGAAGCAGCTATAAGGGAAG
CTAAAGAGGAAACGGGACTAGATATAGAGCTTTTTCCACTAACATATGAATCTTTACCGCCAATAAAAAATTCTATGTAT
AAAAACATGGTAACTTTTATAGGATATCCAGTAAAGGGAGAAGCAAAGGTAGGGTATGATCCAGAAGAAGAGTTAAAAAA
CCTTTATGGATTAGTAGATATAAAGTGGCAGGATTTACGAGATAAAGAGGGATTAACAGAGGTAACTACAAGGGATGTAG
GGGGGATATTAGATAAGCTCCAGATAGAAAATATAGAAGAGGAAAAAATTTTTTTAATATATGAGCAGAAAGATAATGTA
AGGGAGTATTTAGTTTTAAATAATATTAATAATATAAGGGATCAGTGTAGTTCACCCTATATAAATAAAAATATAAGTGA
TAATGAAATAAAATTTTTATGTTTAAATAAAGAAAATGAATATAGTTTCTGTGGAAATAATTGTAGTTTAAATTCAAAAC
GCTGTAGCTGGGAAGTATATTTACAAGAAATATTAGGGATCAAATTAAAAAATGTAACAGAGCAAAAAAAATTAGGCATA
TTTTTGTATAAAAAAAATAATAATTTTTTCAAAAGAAATATTACCCTAATTCCGTTGAAAAAAGAAGAAAAAATTTATAA
AAAGCATACCTTTATAAAAGAAGAAGATGTATTAAAAGAAAATATTTCAGAAGATTTAGTTAGAATATTTACATTTATCA
AGGATAATATATAA

Upstream 100 bases:

>100_bases
TTTGAGCCTCCCTAAATAAGTTTCATGATATTATTCTCTTTAGATAGAGCTTTATAATAAAAAATAACATTAATTTTTTA
GGGAAATAGGAGATGACAAT

Downstream 100 bases:

>100_bases
ATAAGTTTGTAAAACTAATATTAATGATGGTGAAAAACACATATTAAAGAGGCTATTCCATAAAAAGGAAAATGATTTTC
TTTATAGAAGAATTTAAAGG

Product: NUDIX family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MLKRDTRVQIVIVENGKYALLKHWVKLENRYFWALPGGGREKGESLEEAAIREAKEETGLDIELFPLTYESLPPIKNSMY
KNMVTFIGYPVKGEAKVGYDPEEELKNLYGLVDIKWQDLRDKEGLTEVTTRDVGGILDKLQIENIEEEKIFLIYEQKDNV
REYLVLNNINNIRDQCSSPYINKNISDNEIKFLCLNKENEYSFCGNNCSLNSKRCSWEVYLQEILGIKLKNVTEQKKLGI
FLYKKNNNFFKRNITLIPLKKEEKIYKKHTFIKEEDVLKENISEDLVRIFTFIKDNI

Sequences:

>Translated_297_residues
MLKRDTRVQIVIVENGKYALLKHWVKLENRYFWALPGGGREKGESLEEAAIREAKEETGLDIELFPLTYESLPPIKNSMY
KNMVTFIGYPVKGEAKVGYDPEEELKNLYGLVDIKWQDLRDKEGLTEVTTRDVGGILDKLQIENIEEEKIFLIYEQKDNV
REYLVLNNINNIRDQCSSPYINKNISDNEIKFLCLNKENEYSFCGNNCSLNSKRCSWEVYLQEILGIKLKNVTEQKKLGI
FLYKKNNNFFKRNITLIPLKKEEKIYKKHTFIKEEDVLKENISEDLVRIFTFIKDNI
>Mature_297_residues
MLKRDTRVQIVIVENGKYALLKHWVKLENRYFWALPGGGREKGESLEEAAIREAKEETGLDIELFPLTYESLPPIKNSMY
KNMVTFIGYPVKGEAKVGYDPEEELKNLYGLVDIKWQDLRDKEGLTEVTTRDVGGILDKLQIENIEEEKIFLIYEQKDNV
REYLVLNNINNIRDQCSSPYINKNISDNEIKFLCLNKENEYSFCGNNCSLNSKRCSWEVYLQEILGIKLKNVTEQKKLGI
FLYKKNNNFFKRNITLIPLKKEEKIYKKHTFIKEEDVLKENISEDLVRIFTFIKDNI

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34914; Mature: 34914

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRDTRVQIVIVENGKYALLKHWVKLENRYFWALPGGGREKGESLEEAAIREAKEETGL
CCCCCCEEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
DIELFPLTYESLPPIKNSMYKNMVTFIGYPVKGEAKVGYDPEEELKNLYGLVDIKWQDLR
EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCEEEEEECCCC
DKEGLTEVTTRDVGGILDKLQIENIEEEKIFLIYEQKDNVREYLVLNNINNIRDQCSSPY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHCCCC
INKNISDNEIKFLCLNKENEYSFCGNNCSLNSKRCSWEVYLQEILGIKLKNVTEQKKLGI
CCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCEEE
FLYKKNNNFFKRNITLIPLKKEEKIYKKHTFIKEEDVLKENISEDLVRIFTFIKDNI
EEEECCCCEEEEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKRDTRVQIVIVENGKYALLKHWVKLENRYFWALPGGGREKGESLEEAAIREAKEETGL
CCCCCCEEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
DIELFPLTYESLPPIKNSMYKNMVTFIGYPVKGEAKVGYDPEEELKNLYGLVDIKWQDLR
EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCEEEEEECCCC
DKEGLTEVTTRDVGGILDKLQIENIEEEKIFLIYEQKDNVREYLVLNNINNIRDQCSSPY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHCCCC
INKNISDNEIKFLCLNKENEYSFCGNNCSLNSKRCSWEVYLQEILGIKLKNVTEQKKLGI
CCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCEEE
FLYKKNNNFFKRNITLIPLKKEEKIYKKHTFIKEEDVLKENISEDLVRIFTFIKDNI
EEEECCCCEEEEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA