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The map label for this gene is lemA [H]

Identifier: 226947698

GI number: 226947698

Start: 591391

End: 591960

Strand: Direct

Name: lemA [H]

Synonym: CLM_0545

Alternate gene names: 226947698

Gene position: 591391-591960 (Clockwise)

Preceding gene: 226947697

Following gene: 226947699

Centisome position: 14.23

GC content: 30.0

Gene sequence:

>570_bases
ATGAAAAAAGGATTGAGAAATACCCTTATAGTAGTAGGGATAATTTTATTAATATTGTTTCCTTTAATAGGGACATATAA
TAACTTAGTATCTATGGAACAAAATGTTAATAGAGCAGCTTCTAACATTGATACTAATCTTCAAAGAAGATCTGATCTTA
TATCAAATTTGGTAGAAACAGTTAAAGGTTATGCTGCACAGGAAAAAGATATTTTTAAAGGAGTAGCAGATGCAAGATCA
AAATTAGCAGGAGCCCAAAAAATAGATCAAAAAGCTCAAGCTAATGAAGAGTTAACAGGAGCTTTATCAAGATTATTAGT
AGTAGTGGAAAGATATCCAGACTTAAAATCTAGTCAAAATTTTAAAGATTTATCAGTAGCCATAGAGGGAACTGAAAATA
GAATAGCTATTGCAAGGCAAGATTATAATGAATCAGTAAATAATTATAATACTGGTATAAGGAAATTTCCAAATTCTATT
ATAGCTGGTATGTTTAGATTTAGTGAAAAACCATATTTTAAAGCAGAAGCAGGAGCAGGTAAAGCACCCAAAGTAGATTT
CTCAAAGTAG

Upstream 100 bases:

>100_bases
AGGAAATCTAACAAAAAAACTTATAAATAATTATATTTAGTGAAAATTTTGTTAAATTAATGTATAATATTAATAAAAAT
ATTAAAATGGTGGTGAGTTT

Downstream 100 bases:

>100_bases
GTGAAAAACGTGGAAAATTTTTTTGAAAAATATCTAAGCAGAAGGAGATTAACTTTTGTATTGATAATGACCTTAATTAT
GATCTTCCCAATGCTTACAA

Product: lemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKGLRNTLIVVGIILLILFPLIGTYNNLVSMEQNVNRAASNIDTNLQRRSDLISNLVETVKGYAAQEKDIFKGVADARS
KLAGAQKIDQKAQANEELTGALSRLLVVVERYPDLKSSQNFKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSI
IAGMFRFSEKPYFKAEAGAGKAPKVDFSK

Sequences:

>Translated_189_residues
MKKGLRNTLIVVGIILLILFPLIGTYNNLVSMEQNVNRAASNIDTNLQRRSDLISNLVETVKGYAAQEKDIFKGVADARS
KLAGAQKIDQKAQANEELTGALSRLLVVVERYPDLKSSQNFKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSI
IAGMFRFSEKPYFKAEAGAGKAPKVDFSK
>Mature_189_residues
MKKGLRNTLIVVGIILLILFPLIGTYNNLVSMEQNVNRAASNIDTNLQRRSDLISNLVETVKGYAAQEKDIFKGVADARS
KLAGAQKIDQKAQANEELTGALSRLLVVVERYPDLKSSQNFKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSI
IAGMFRFSEKPYFKAEAGAGKAPKVDFSK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20914; Mature: 20914

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGLRNTLIVVGIILLILFPLIGTYNNLVSMEQNVNRAASNIDTNLQRRSDLISNLVET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGYAAQEKDIFKGVADARSKLAGAQKIDQKAQANEELTGALSRLLVVVERYPDLKSSQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSIIAGMFRFSEKPYFKAEAGAG
CCHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
KAPKVDFSK
CCCCCCCCC
>Mature Secondary Structure
MKKGLRNTLIVVGIILLILFPLIGTYNNLVSMEQNVNRAASNIDTNLQRRSDLISNLVET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGYAAQEKDIFKGVADARSKLAGAQKIDQKAQANEELTGALSRLLVVVERYPDLKSSQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSIIAGMFRFSEKPYFKAEAGAG
CCHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
KAPKVDFSK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]