Click here to switch to the map view.

The map label for this gene is 226947694

Identifier: 226947694

GI number: 226947694

Start: 587364

End: 588140

Strand: Direct

Name: 226947694

Synonym: CLM_0541

Alternate gene names: NA

Gene position: 587364-588140 (Clockwise)

Preceding gene: 226947693

Following gene: 226947695

Centisome position: 14.14

GC content: 25.61

Gene sequence:

>777_bases
ATGGATATAAAAAACATATGCCAGAATTTATATGCTACATTAAATTTAGAGAGAAAAATGGTAGGGATTAAATTTATATT
TACAAAAGAGCATTTTGAAAAATTAGACATTCCTAAATTAAATAGCAAAGTGAATTATTGCTACATGGTTAAAATAGCTT
CAAATGGAAGAGAATTTAAAGCTAATGAAGAAAATTTTAATTGTTTAGCTTCTGCGAGAGCTTTAGGTATAATTTCTAGT
AATAATTATGTAGACTCAGGACAACATTATGGAAAACACGGTTTATATGATAGCTTAGCTACGGCTAAAAAGGTACAAAA
AGATATTACATTTATAAATCACTCAATATATGGTATAGAAATTAGCCCTTTAGAAAATTTTATAAAAGAGCCAGATGTAG
TTGTTATTATAACTAATCCATATAATGTAATGCGAATAGTTCAGGCATATACTTATAAATATGGAGTACATAAAAATATA
ACTTTAGGTGGGAATCAAGGAATATGTTCTGAATGTACAGCTGTTCCTTATGAAAATAATGATCTTAATATATCAACCTT
GTGCTCTGGAACAAGATTTTTTTGTAAATGGGATGAATGTGATATGGGAGTAGGATTTCCATTTAATAAGCTTAAAGATA
TTGAAAATGGAATATTAAAAACATTAAATCCAACAGAGCAAAATTATAAGAAAAAAAAGATAGAATTAAAGTGTAAGAAT
ATAGAAAATAATATTGATATAAAGTATAATGAAAACTATTTTGTTAATTATAAATGA

Upstream 100 bases:

>100_bases
ATAGTATTAGAGGGTAGTACAGATGAGTTGATTAAAAGCAATTTTATTAAAAAAATTTATCTTGGAAGATAGAGTTCATA
TAAAAAGAGAGGGTAACTTT

Downstream 100 bases:

>100_bases
TGCTAGAATTAAGCTTAAAAAATAAATTTTTATTATATTAGTTTTATTTTAAAATTTTTATTAAAGAATTAGTATTGCAT
AATATAAAGCACTATGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKIASNGREFKANEENFNCLASARALGIISS
NNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHSIYGIEISPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNI
TLGGNQGICSECTAVPYENNDLNISTLCSGTRFFCKWDECDMGVGFPFNKLKDIENGILKTLNPTEQNYKKKKIELKCKN
IENNIDIKYNENYFVNYK

Sequences:

>Translated_258_residues
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKIASNGREFKANEENFNCLASARALGIISS
NNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHSIYGIEISPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNI
TLGGNQGICSECTAVPYENNDLNISTLCSGTRFFCKWDECDMGVGFPFNKLKDIENGILKTLNPTEQNYKKKKIELKCKN
IENNIDIKYNENYFVNYK
>Mature_258_residues
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKIASNGREFKANEENFNCLASARALGIISS
NNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHSIYGIEISPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNI
TLGGNQGICSECTAVPYENNDLNISTLCSGTRFFCKWDECDMGVGFPFNKLKDIENGILKTLNPTEQNYKKKKIELKCKN
IENNIDIKYNENYFVNYK

Specific function: Unknown

COG id: COG2043

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003748 [H]

Pfam domain/function: PF02596 DUF169 [H]

EC number: NA

Molecular weight: Translated: 29632; Mature: 29632

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKIASNGREFK
CCHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEC
ANEENFNCLASARALGIISSNNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHSIYGIE
CCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCEEEEEE
ISPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNITLGGNQGICSECTAVPYENN
ECHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCC
DLNISTLCSGTRFFCKWDECDMGVGFPFNKLKDIENGILKTLNPTEQNYKKKKIELKCKN
CCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCEEEEEEEEEC
IENNIDIKYNENYFVNYK
CCCCEEEEECCCEEEEEC
>Mature Secondary Structure
MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVNYCYMVKIASNGREFK
CCHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEC
ANEENFNCLASARALGIISSNNYVDSGQHYGKHGLYDSLATAKKVQKDITFINHSIYGIE
CCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCEEEEEE
ISPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNITLGGNQGICSECTAVPYENN
ECHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCC
DLNISTLCSGTRFFCKWDECDMGVGFPFNKLKDIENGILKTLNPTEQNYKKKKIELKCKN
CCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCEEEEEEEEEC
IENNIDIKYNENYFVNYK
CCCCEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]