| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is 226947670
Identifier: 226947670
GI number: 226947670
Start: 558310
End: 559296
Strand: Direct
Name: 226947670
Synonym: CLM_0514
Alternate gene names: NA
Gene position: 558310-559296 (Clockwise)
Preceding gene: 226947669
Following gene: 226947672
Centisome position: 13.44
GC content: 33.64
Gene sequence:
>987_bases ATGTTTGAATTTAACTATGCTGAAGGAGCAACTATATTTACTGCATTGGGAATATGGTTTATTGTTTTTGCATCATTGTT TTTGTTTAATGAATTTGCAAGAAGGAAAAAGTGGGTAGGATTTTTTAGCTTTGTTGTTCTACCTATTATTTTAACAATCA CATGGTTTACTGTTTTAAAGGATGTTACCTATACAGACTGGTTCCATTTAGCAAAAGTTTATTCTGCAACAGCAGGATGT ATCGGTTTCTGGTTCATTCGCCATATTGAGAAAAAAGACAAACTTACTGGTGAGGTTGTTTGGAGGCTGGCGGACAATAA GATTGCTTTATGTTTTCCCCCATTAATTCTTGCCATTAATATTCTAGAAGCAGTTGGAAGGGATATTGAAGTGGGATCTC TATATTGGATGATGAATTCAGGAGCCATTAAAGGGGAAATAGTAGGTGTAATGGGTGGACCTTGGAACTATATGAATGCG GTTGCTGGTATATTGAATATTATTACAATCACTGGTTGGTTTGGAATAACAATTAGAAAAGAAACTAATAAGGATAAAAG TAGGGATATGATATGGCCAGATATGCTTTGGTTTTGGATTATTGCATATGATGTGTGGAATTTTGTGTATACTTATAACT GTATACCTACTCATTCTTGGTACGCAGGTCTTGCATTACTTTTTGCTCCAACACTTTGTGCTTTCACTGTTGGAAAGGGC GCTTGGTTACAGCACAGGGCTCAAACCTTAGCAATATGGTGTATGTTTGCTCAAACTTTCCCAAAATTTCAGGATACAGG AATGTTTGTAGTTAAATCAACTTATAATCCTACTATTTATATAATTTTAAGTGCAATAGCTCTTGGAGTTAATATAGCTG TATTTATTTATATGATATATAAGGTAAAGAAAACAAAGAAAAATCCATACAAGCAAGAACTTTATAGTGATCTTGATAAA TTCAAAGAAGTTAAAATCATGGCATAA
Upstream 100 bases:
>100_bases AGTAGGGAGTGGGAGTTATTATGTGGAAAAGAGTTTTTAATTAAAGAAATATTAGCCTATTAGATAATCAAAAATTTTAG AGATGTAAAGGGGGAGAAAA
Downstream 100 bases:
>100_bases AATAAAATCTATTTATAGTAAAAAATGTAGGTTAAAAACCTACATTTTTTATTCTTATTGAGGAATATAGTATTATTTAT TTAATTTTTTTAAGACTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MFEFNYAEGATIFTALGIWFIVFASLFLFNEFARRKKWVGFFSFVVLPIILTITWFTVLKDVTYTDWFHLAKVYSATAGC IGFWFIRHIEKKDKLTGEVVWRLADNKIALCFPPLILAINILEAVGRDIEVGSLYWMMNSGAIKGEIVGVMGGPWNYMNA VAGILNIITITGWFGITIRKETNKDKSRDMIWPDMLWFWIIAYDVWNFVYTYNCIPTHSWYAGLALLFAPTLCAFTVGKG AWLQHRAQTLAIWCMFAQTFPKFQDTGMFVVKSTYNPTIYIILSAIALGVNIAVFIYMIYKVKKTKKNPYKQELYSDLDK FKEVKIMA
Sequences:
>Translated_328_residues MFEFNYAEGATIFTALGIWFIVFASLFLFNEFARRKKWVGFFSFVVLPIILTITWFTVLKDVTYTDWFHLAKVYSATAGC IGFWFIRHIEKKDKLTGEVVWRLADNKIALCFPPLILAINILEAVGRDIEVGSLYWMMNSGAIKGEIVGVMGGPWNYMNA VAGILNIITITGWFGITIRKETNKDKSRDMIWPDMLWFWIIAYDVWNFVYTYNCIPTHSWYAGLALLFAPTLCAFTVGKG AWLQHRAQTLAIWCMFAQTFPKFQDTGMFVVKSTYNPTIYIILSAIALGVNIAVFIYMIYKVKKTKKNPYKQELYSDLDK FKEVKIMA >Mature_328_residues MFEFNYAEGATIFTALGIWFIVFASLFLFNEFARRKKWVGFFSFVVLPIILTITWFTVLKDVTYTDWFHLAKVYSATAGC IGFWFIRHIEKKDKLTGEVVWRLADNKIALCFPPLILAINILEAVGRDIEVGSLYWMMNSGAIKGEIVGVMGGPWNYMNA VAGILNIITITGWFGITIRKETNKDKSRDMIWPDMLWFWIIAYDVWNFVYTYNCIPTHSWYAGLALLFAPTLCAFTVGKG AWLQHRAQTLAIWCMFAQTFPKFQDTGMFVVKSTYNPTIYIILSAIALGVNIAVFIYMIYKVKKTKKNPYKQELYSDLDK FKEVKIMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37830; Mature: 37830
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEFNYAEGATIFTALGIWFIVFASLFLFNEFARRKKWVGFFSFVVLPIILTITWFTVLK CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVTYTDWFHLAKVYSATAGCIGFWFIRHIEKKDKLTGEVVWRLADNKIALCFPPLILAIN HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCEEEEEHHHHHHHHH ILEAVGRDIEVGSLYWMMNSGAIKGEIVGVMGGPWNYMNAVAGILNIITITGWFGITIRK HHHHCCCCCEECEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEE ETNKDKSRDMIWPDMLWFWIIAYDVWNFVYTYNCIPTHSWYAGLALLFAPTLCAFTVGKG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC AWLQHRAQTLAIWCMFAQTFPKFQDTGMFVVKSTYNPTIYIILSAIALGVNIAVFIYMIY HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH KVKKTKKNPYKQELYSDLDKFKEVKIMA HHHHHCCCCHHHHHHHHHHHHHHCEECC >Mature Secondary Structure MFEFNYAEGATIFTALGIWFIVFASLFLFNEFARRKKWVGFFSFVVLPIILTITWFTVLK CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVTYTDWFHLAKVYSATAGCIGFWFIRHIEKKDKLTGEVVWRLADNKIALCFPPLILAIN HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCEEEEEHHHHHHHHH ILEAVGRDIEVGSLYWMMNSGAIKGEIVGVMGGPWNYMNAVAGILNIITITGWFGITIRK HHHHCCCCCEECEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEE ETNKDKSRDMIWPDMLWFWIIAYDVWNFVYTYNCIPTHSWYAGLALLFAPTLCAFTVGKG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC AWLQHRAQTLAIWCMFAQTFPKFQDTGMFVVKSTYNPTIYIILSAIALGVNIAVFIYMIY HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH KVKKTKKNPYKQELYSDLDKFKEVKIMA HHHHHCCCCHHHHHHHHHHHHHHCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA