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The map label for this gene is panD [H]

Identifier: 226947659

GI number: 226947659

Start: 544467

End: 544850

Strand: Reverse

Name: panD [H]

Synonym: CLM_0503

Alternate gene names: 226947659

Gene position: 544850-544467 (Counterclockwise)

Preceding gene: 226947660

Following gene: 226947658

Centisome position: 13.11

GC content: 27.34

Gene sequence:

>384_bases
ATGACAATAACAATGTTAAAATCTAAAATTCATAGAGCTACTGTAACAGAAGCCAATCTTAACTATGTAGGAAGTATAAC
TATAGACAAAAATTTAATGGATAAAGCTAATATTTTGGAATATGAAAAAGTTCAAATAGTGGATATAGATAATGGAAATA
GATTTGAAACCTATGTAATAGCTGGTGAAAAACATAGTGGTGTAATCTGTTTAAATGGTGCTGCTGCACGAATGGTTCAA
AAGGGCGATAAAATTATAATAATGAGTTACTATGATCTAACTATAGATGAAGCTAACAAATTTAATCCTACAGTATTATT
TGTAGACAATAAAAATAACATAGAGAAATTAACCAACTACGAAAAACATGGAGAAATAATATAA

Upstream 100 bases:

>100_bases
GTGATCGGATAAATATTTTTTGAACGCTAATCTATTATTAATAATAAATACGGCATATTGTAAAGTTATACACCAAATGC
CTAAAGTGAGGTATAAACAA

Downstream 100 bases:

>100_bases
TTGTTTTTATTAATATTTTCCTAAAACTTATAATTTAGTTATTTTTGCAAATACTAACATTGTAAAACTAATAAAGGAGA
GGAAAATATGAAAACATTAG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTITMLKSKIHRATVTEANLNYVGSITIDKNLMDKANILEYEKVQIVDIDNGNRFETYVIAGEKHSGVICLNGAAARMVQ
KGDKIIIMSYYDLTIDEANKFNPTVLFVDNKNNIEKLTNYEKHGEII

Sequences:

>Translated_127_residues
MTITMLKSKIHRATVTEANLNYVGSITIDKNLMDKANILEYEKVQIVDIDNGNRFETYVIAGEKHSGVICLNGAAARMVQ
KGDKIIIMSYYDLTIDEANKFNPTVLFVDNKNNIEKLTNYEKHGEII
>Mature_126_residues
TITMLKSKIHRATVTEANLNYVGSITIDKNLMDKANILEYEKVQIVDIDNGNRFETYVIAGEKHSGVICLNGAAARMVQK
GDKIIIMSYYDLTIDEANKFNPTVLFVDNKNNIEKLTNYEKHGEII

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=116, Percent_Identity=42.2413793103448, Blast_Score=103, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 14370; Mature: 14239

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITMLKSKIHRATVTEANLNYVGSITIDKNLMDKANILEYEKVQIVDIDNGNRFETYVI
CEEEEEHHHHHHEEEEECCCCEEEEEEECCCCCCCCCCEEECEEEEEECCCCCEEEEEEE
AGEKHSGVICLNGAAARMVQKGDKIIIMSYYDLTIDEANKFNPTVLFVDNKNNIEKLTNY
ECCCCCCEEEECCHHHHHHHCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHCCC
EKHGEII
CCCCCCC
>Mature Secondary Structure 
TITMLKSKIHRATVTEANLNYVGSITIDKNLMDKANILEYEKVQIVDIDNGNRFETYVI
EEEEEHHHHHHEEEEECCCCEEEEEEECCCCCCCCCCEEECEEEEEECCCCCEEEEEEE
AGEKHSGVICLNGAAARMVQKGDKIIIMSYYDLTIDEANKFNPTVLFVDNKNNIEKLTNY
ECCCCCCEEEECCHHHHHHHCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHCCC
EKHGEII
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA