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The map label for this gene is cobQ [H]

Identifier: 226947644

GI number: 226947644

Start: 521927

End: 522655

Strand: Reverse

Name: cobQ [H]

Synonym: CLM_0481

Alternate gene names: 226947644

Gene position: 522655-521927 (Counterclockwise)

Preceding gene: 226947645

Following gene: 226947641

Centisome position: 12.58

GC content: 29.9

Gene sequence:

>729_bases
ATGGAACTTAATATATGTCACCTATACCCTGATCTATTAAATGTATATGGGGATATAGGTAATATTCTAGTATTAAAATA
TAGAGCTCAGCAAAGAGGCATAAAAATAAATGTATCTAATGTTTCTATAAAAGATAGTTTCCCTATAGATAAATATGATA
TAGCCTTATTTGGAGGCGGTCAGGATTATGAACAATCTATAGTTTCAAAGGATATGGTAGAAACTAAAAAAGATGACCTT
ACAGAATACATAGAAAAAGGAAAAGTTTTATTAGCTATCTGTGGTGGTTATCAATTATTAGGTAAATATTATACTACACC
AGAAGGTGAAAAACTTGATGGATTAGACATATTAGATATATACACCGAAGGTGGAGATATTAGGTTTATAGGAAATACAG
TAATAAAAAATGAAGAATTTAATGAAACCTATGTGGGTTTCGAAAATCATTCTGGAAGAACCTATATAGGAAATTTAAAA
CCTTTAGGTAAAGTTATAGCTGGATATGGCAATAACGGTGAAGATCAAGAAGAAGGCTGTATATATAAAAATACCTTCTG
CACCTATTTCCATGGTTCTCTACTTTCCAAAAACCCAGAATTAGCAGATAGACTACTTTCTACTGCTCTAAAAAATAAAT
ATGGCGAAGAAATAGAGCTAGAACCTTTAGATGATAATCTAGAATTTAAAGCAAAAGAATTTATAGTCAATAGAGAAAGT
AAAGCTTAA

Upstream 100 bases:

>100_bases
AAAATTTCTAAATTCTAAAGGATATATTAAAAAGTTGTGGTAATTAATATATAAATCAATTAAATTAAGTATTCTAACTA
ATATAAAGAAGGTGAAATAC

Downstream 100 bases:

>100_bases
TTTAAGAAAATTATTATAACAACCTTTAAAGGTATTAAAACAAGAAATACTTTTAGAGAAAATAGATATCTAGAAAAATA
ATCAGAATACTTTATTTGTG

Product: glutamine amidotransferase, CobB/CobQ family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MELNICHLYPDLLNVYGDIGNILVLKYRAQQRGIKINVSNVSIKDSFPIDKYDIALFGGGQDYEQSIVSKDMVETKKDDL
TEYIEKGKVLLAICGGYQLLGKYYTTPEGEKLDGLDILDIYTEGGDIRFIGNTVIKNEEFNETYVGFENHSGRTYIGNLK
PLGKVIAGYGNNGEDQEEGCIYKNTFCTYFHGSLLSKNPELADRLLSTALKNKYGEEIELEPLDDNLEFKAKEFIVNRES
KA

Sequences:

>Translated_242_residues
MELNICHLYPDLLNVYGDIGNILVLKYRAQQRGIKINVSNVSIKDSFPIDKYDIALFGGGQDYEQSIVSKDMVETKKDDL
TEYIEKGKVLLAICGGYQLLGKYYTTPEGEKLDGLDILDIYTEGGDIRFIGNTVIKNEEFNETYVGFENHSGRTYIGNLK
PLGKVIAGYGNNGEDQEEGCIYKNTFCTYFHGSLLSKNPELADRLLSTALKNKYGEEIELEPLDDNLEFKAKEFIVNRES
KA
>Mature_242_residues
MELNICHLYPDLLNVYGDIGNILVLKYRAQQRGIKINVSNVSIKDSFPIDKYDIALFGGGQDYEQSIVSKDMVETKKDDL
TEYIEKGKVLLAICGGYQLLGKYYTTPEGEKLDGLDILDIYTEGGDIRFIGNTVIKNEEFNETYVGFENHSGRTYIGNLK
PLGKVIAGYGNNGEDQEEGCIYKNTFCTYFHGSLLSKNPELADRLLSTALKNKYGEEIELEPLDDNLEFKAKEFIVNRES
KA

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG3442

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 27273; Mature: 27273

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNICHLYPDLLNVYGDIGNILVLKYRAQQRGIKINVSNVSIKDSFPIDKYDIALFGGG
CCCEEEEECHHHHHHHCCCCCEEEEEEEHHHCCEEEEEEEEEECCCCCCCCEEEEEEECC
QDYEQSIVSKDMVETKKDDLTEYIEKGKVLLAICGGYQLLGKYYTTPEGEKLDGLDILDI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCCCCCCCEEEEE
YTEGGDIRFIGNTVIKNEEFNETYVGFENHSGRTYIGNLKPLGKVIAGYGNNGEDQEEGC
EECCCCEEEECCEEECCCCCCCEEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCC
IYKNTFCTYFHGSLLSKNPELADRLLSTALKNKYGEEIELEPLDDNLEFKAKEFIVNRES
EEECCEEEEECCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHEEECCC
KA
CC
>Mature Secondary Structure
MELNICHLYPDLLNVYGDIGNILVLKYRAQQRGIKINVSNVSIKDSFPIDKYDIALFGGG
CCCEEEEECHHHHHHHCCCCCEEEEEEEHHHCCEEEEEEEEEECCCCCCCCEEEEEEECC
QDYEQSIVSKDMVETKKDDLTEYIEKGKVLLAICGGYQLLGKYYTTPEGEKLDGLDILDI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCCCCCCCEEEEE
YTEGGDIRFIGNTVIKNEEFNETYVGFENHSGRTYIGNLKPLGKVIAGYGNNGEDQEEGC
EECCCCEEEECCEEECCCCCCCEEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCC
IYKNTFCTYFHGSLLSKNPELADRLLSTALKNKYGEEIELEPLDDNLEFKAKEFIVNRES
EEECCEEEEECCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHEEECCC
KA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]