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The map label for this gene is yxaC [H]

Identifier: 226947556

GI number: 226947556

Start: 413814

End: 414509

Strand: Direct

Name: yxaC [H]

Synonym: CLM_0393

Alternate gene names: 226947556

Gene position: 413814-414509 (Clockwise)

Preceding gene: 226947555

Following gene: 226947557

Centisome position: 9.96

GC content: 29.17

Gene sequence:

>696_bases
ATGATCCAAGATATTTTAAATTCCCCTGTTTTTGGAATCTTATTATCGATAATAGGTTTTGAAATAGGACTTTACATATA
TAGAAAAACAAAAATAGCCTTATTTAATCCTCTTTTAATATGTATAGCTTTAATAGTATGTATATTAATATCCTTTAATA
TTAAATTAGATAATTTTAATAAAGGTGGCAATCTTATATCTTTCTTTTTGGGACCTGCTACTGTAGCACTTGCTGTACCA
TTGTATAAAAAAATAAATGTAATAAAAAAATATGCTATACCTATATTACTGGGGGTAACTGTGGGTTGTATAACTGCTAT
GATAAGTATATTCTATATTTCTAAAGCGTTTGGTCTGACCAGTGAATTATCTTATTCATTGATGCCAAAATCTATAACAA
CACCTATAGGTATAGAAGTGTCTAAAGTTTTAGGTGGTATACCTGCCATTACGGTATCTGCTATTATAATAACAGGTATA
ATGGGAGCTGTAATAGCTCCTATAGTGTGTAAGATATTTAAAATTAAAAACAATATAGCTATAGGTATTTCTATTGGAAC
ATCATCCCATGCTATAGGTACCACAAAAGCTATAGAAATGGGAGAAACTGAAGGAGCTATGAGTAGCTTAGCTATAGGTA
TAGCGGGACTTATTACTTCTTTCTTAGCTCCTATAATAATAAAATTTTTACATTAA

Upstream 100 bases:

>100_bases
CATTTTTAGGAGTATGCTTAATAACAAGTATTATTATAATAGTTGTTACGGGTTGGACTATTCAACTATATATAAAATTA
ACAAGTAAGGAGGTGTAAGA

Downstream 100 bases:

>100_bases
TTATTGATTGTTTTTATTTCGTTTTATTTTAACTAATTTATTTTTATATAGGATCTTATCAAAATAATTAATTTTAATAA
AAGGGTGTCTCAAAATAGAT

Product: lrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIQDILNSPVFGILLSIIGFEIGLYIYRKTKIALFNPLLICIALIVCILISFNIKLDNFNKGGNLISFFLGPATVALAVP
LYKKINVIKKYAIPILLGVTVGCITAMISIFYISKAFGLTSELSYSLMPKSITTPIGIEVSKVLGGIPAITVSAIIITGI
MGAVIAPIVCKIFKIKNNIAIGISIGTSSHAIGTTKAIEMGETEGAMSSLAIGIAGLITSFLAPIIIKFLH

Sequences:

>Translated_231_residues
MIQDILNSPVFGILLSIIGFEIGLYIYRKTKIALFNPLLICIALIVCILISFNIKLDNFNKGGNLISFFLGPATVALAVP
LYKKINVIKKYAIPILLGVTVGCITAMISIFYISKAFGLTSELSYSLMPKSITTPIGIEVSKVLGGIPAITVSAIIITGI
MGAVIAPIVCKIFKIKNNIAIGISIGTSSHAIGTTKAIEMGETEGAMSSLAIGIAGLITSFLAPIIIKFLH
>Mature_231_residues
MIQDILNSPVFGILLSIIGFEIGLYIYRKTKIALFNPLLICIALIVCILISFNIKLDNFNKGGNLISFFLGPATVALAVP
LYKKINVIKKYAIPILLGVTVGCITAMISIFYISKAFGLTSELSYSLMPKSITTPIGIEVSKVLGGIPAITVSAIIITGI
MGAVIAPIVCKIFKIKNNIAIGISIGTSSHAIGTTKAIEMGETEGAMSSLAIGIAGLITSFLAPIIIKFLH

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=216, Percent_Identity=35.6481481481481, Blast_Score=140, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24444; Mature: 24444

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQDILNSPVFGILLSIIGFEIGLYIYRKTKIALFNPLLICIALIVCILISFNIKLDNFN
CCHHHHCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
KGGNLISFFLGPATVALAVPLYKKINVIKKYAIPILLGVTVGCITAMISIFYISKAFGLT
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SELSYSLMPKSITTPIGIEVSKVLGGIPAITVSAIIITGIMGAVIAPIVCKIFKIKNNIA
HHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IGISIGTSSHAIGTTKAIEMGETEGAMSSLAIGIAGLITSFLAPIIIKFLH
EEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQDILNSPVFGILLSIIGFEIGLYIYRKTKIALFNPLLICIALIVCILISFNIKLDNFN
CCHHHHCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
KGGNLISFFLGPATVALAVPLYKKINVIKKYAIPILLGVTVGCITAMISIFYISKAFGLT
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SELSYSLMPKSITTPIGIEVSKVLGGIPAITVSAIIITGIMGAVIAPIVCKIFKIKNNIA
HHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IGISIGTSSHAIGTTKAIEMGETEGAMSSLAIGIAGLITSFLAPIIIKFLH
EEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]