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The map label for this gene is 226947479

Identifier: 226947479

GI number: 226947479

Start: 300513

End: 301004

Strand: Direct

Name: 226947479

Synonym: CLM_0313

Alternate gene names: NA

Gene position: 300513-301004 (Clockwise)

Preceding gene: 226947477

Following gene: 226947485

Centisome position: 7.23

GC content: 32.32

Gene sequence:

>492_bases
ATGATTGCATTTAATTTTGAATACTATAAACCTGATTCATTGGACGAGGCGGTAAAGCTGCATAAAGGACTTAGTGAGAG
TGGAAAGGAACCTTTATATTATTCTGGTGGTACAGAAATAATTACTATGGCAAGAAGAAATGATTTGGTTACAAAGGCAG
TAATAGATATTAAAGGAATTGAGGCAGTTTTAGGTCATTTAATTGGAGATAGTAGTGTAAGTATATACAGGAAAAAAGGT
AAAAGGATTGTTCCAATAATTCAGGCTTTTAATCAAAGACTTCAACTGAAAAAAGGGGAGTTTCTTTTTCAATTGTCAAC
AGAAATGAGCTACTCTAATTTACCTTATATAGTAAGCACTATTAGAAGTAATGGAGAAGGATATCCCCTCGCTTCCACTA
TGAAATCCCCGACAATACAGAAATGTGTTGTCGGGGTTATTTTAGTTTGTATGAATTTAGAGAAAGACTTTATATTTATA
ATTACTATGTAA

Upstream 100 bases:

>100_bases
AAGCACTTGCAAATAGTTTATCCTGTGCAGTAGAAGCACCTATTAATCAATTACCGTTGATTCCTCAATTCATATGGAAA
GTAAAAGAGGGAGTACATTA

Downstream 100 bases:

>100_bases
AGAAGAATAGCATATTAAAAGCAAAATCTATAATCTTAGTATTAGTACAGGTGAGCTGTATCATAAATGATATAGACTTT
TTTATATTTGAGTTCCTATA

Product: xanthine dehydrogenase family protein FAD-binding subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIAFNFEYYKPDSLDEAVKLHKGLSESGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGIEAVLGHLIGDSSVSIYRKKG
KRIVPIIQAFNQRLQLKKGEFLFQLSTEMSYSNLPYIVSTIRSNGEGYPLASTMKSPTIQKCVVGVILVCMNLEKDFIFI
ITM

Sequences:

>Translated_163_residues
MIAFNFEYYKPDSLDEAVKLHKGLSESGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGIEAVLGHLIGDSSVSIYRKKG
KRIVPIIQAFNQRLQLKKGEFLFQLSTEMSYSNLPYIVSTIRSNGEGYPLASTMKSPTIQKCVVGVILVCMNLEKDFIFI
ITM
>Mature_163_residues
MIAFNFEYYKPDSLDEAVKLHKGLSESGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGIEAVLGHLIGDSSVSIYRKKG
KRIVPIIQAFNQRLQLKKGEFLFQLSTEMSYSNLPYIVSTIRSNGEGYPLASTMKSPTIQKCVVGVILVCMNLEKDFIFI
ITM

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18278; Mature: 18278

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFNFEYYKPDSLDEAVKLHKGLSESGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGI
CEEEEECCCCCCCHHHHHHHHHCHHHCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHH
EAVLGHLIGDSSVSIYRKKGKRIVPIIQAFNQRLQLKKGEFLFQLSTEMSYSNLPYIVST
HHHHHHHHCCCCCEEHHHCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHH
IRSNGEGYPLASTMKSPTIQKCVVGVILVCMNLEKDFIFIITM
HHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure
MIAFNFEYYKPDSLDEAVKLHKGLSESGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGI
CEEEEECCCCCCCHHHHHHHHHCHHHCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHH
EAVLGHLIGDSSVSIYRKKGKRIVPIIQAFNQRLQLKKGEFLFQLSTEMSYSNLPYIVST
HHHHHHHHCCCCCEEHHHCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHH
IRSNGEGYPLASTMKSPTIQKCVVGVILVCMNLEKDFIFIITM
HHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA